RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 APOOLQ6UXV4 268 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 ZAR1Q86SH2 424 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 CLECL1Q8IZS7 167 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 FADS6Q8N9I5 356 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 GATSQ8NAP1 163 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 OR5M1Q8NGP8 315 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 CDS1Q92903 461 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 SPOCK3Q9BQ16 436 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 PTGES2Q9H7Z7 377 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 MEAF6Q9HAF1 191 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 NEUROD4Q9HD90 331 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 FBXO34Q9NWN3 711 aa13.15□□□□□ -0.3
SEC23A-204ENST00000548032 FAF1Q9UNN5 650 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-204ENST00000548032 IL2RAP01589 272 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 CPN1P15169 458 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 HPGDP15428 266 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 BMP5P22003 454 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 C21orf58P58505 322 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 HBA1P69905 142 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 TFF3Q07654 80 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.14□□□□□ -0.31
SEC23A-204ENST00000548032 NSUN5P2Q63ZY6 315 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 ATG16L1Q676U5 607 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 CDC73Q6P1J9 531 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 ANKRD46Q86W74 232 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 CLEC4FQ8N1N0 589 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 NAXEQ8NCW5 288 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 OR4C3Q8NH37 302 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 ADAMTS15Q8TE58 950 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 TUBA1CQ9BQE3 449 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 BTBD2Q9BX70 525 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 ACTRT3Q9BYD9 372 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 TRIM8Q9BZR9 551 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 ENKD1Q9H0I2 346 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 PIGUQ9H490 435 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 MANSC1Q9H8J5 431 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 GIN1Q9NXP7 522 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 MRPS18CQ9Y3D5 142 aaKnown RBP13.14□□□□□ -0.31
SEC23A-204ENST00000548032 POLQO75417 2590 aa13.14□□□□□ -0.31
SEC23A-204ENST00000548032 GOLGA8QA0A0J9YX86 632 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 GOLGA8OA6NCC3 632 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 GOLGA8NF8WBI6 632 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 SCDO00767 359 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 SDHDO14521 159 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 NDUFB5O43674 189 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 SNNO75324 88 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 OXSR1O95747 527 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 KRT16P08779 473 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 ATP6V1C1P21283 382 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 MSX1P28360 303 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 TIMP3P35625 211 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 LHX2P50458 406 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 RNF144AP50876 292 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 AGFG1P52594 562 aaKnown RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 DGKQP52824 942 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 SLC18A1P54219 525 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 RPS26P62854 115 aaKnown RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 C17orf67Q0P5P2 114 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 SLC25A35Q3KQZ1 300 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 PLXDC2Q6UX71 529 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 WDR75Q8IWA0 830 aaKnown RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 UBQLNLQ8IYU4 475 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 OR4A15Q8NGL6 344 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 PSMA8Q8TAA3 256 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 SFXN5Q8TD22 340 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 MOAP1Q96BY2 351 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 C1GALT1C1Q96EU7 318 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 STACQ99469 402 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 WDR55Q9H6Y2 383 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-204ENST00000548032 DUSP22Q9NRW4 184 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 GPATCH2Q9NW75 528 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 PCDHGB4Q9UN71 923 aa13.13□□□□□ -0.31
SEC23A-204ENST00000548032 RNF103-CHMP3A0A140T963 221 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 TRPC5OSA6NMA1 111 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 CLCA1A8K7I4 914 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 ALG1L2C9J202 215 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 RNASET2O00584 256 aaKnown RBP13.12□□□□□ -0.31
SEC23A-204ENST00000548032 DVL2O14641 736 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 HDAC3O15379 428 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 CPSF4O95639 269 aaKnown RBP13.12□□□□□ -0.31
SEC23A-204ENST00000548032 TBXA2RP21731 343 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 CHMP24386 653 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 EPHA3P29320 983 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 CEACAM8P31997 349 aaPredicted RBP13.12□□□□□ -0.31
SEC23A-204ENST00000548032 GANABQ14697 944 aaKnown RBP13.12□□□□□ -0.31
SEC23A-204ENST00000548032 EXOSC6Q5RKV6 272 aaKnown RBP13.12□□□□□ -0.31
SEC23A-204ENST00000548032 DCST2Q5T1A1 773 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 AGBL2Q5U5Z8 902 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 NXNQ6DKJ4 435 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 CHMP1BQ7LBR1 199 aa13.12□□□□□ -0.31
SEC23A-204ENST00000548032 ZNF295-AS1Q8N0V1 137 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms