RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CLHC1Q8NHS4 586 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 PPP1R14CQ8TAE6 165 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 LINC01560Q8TB33 94 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 TCP10LQ8TDR4 215 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 NRGNQ92686 78 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 HOXB13Q92826 284 aaPredicted RBP8.46□□□□□ -1.06
YBX3-218ENST00000546298 CIDECQ96AQ7 238 aaPredicted RBP8.46□□□□□ -1.06
YBX3-218ENST00000546298 DACH2Q96NX9 599 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 SLC39A3Q9BRY0 314 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 G6PC3Q9BUM1 346 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 ATAD3AQ9NVI7 634 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 SLC17A7Q9P2U7 560 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 ATP6V1HQ9UI12 483 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 ST6GALNAC2Q9UJ37 374 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 ZNF337Q9Y3M9 751 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 AP4B1Q9Y6B7 739 aa8.46□□□□□ -1.06
YBX3-218ENST00000546298 A0A1W2PRB8 838 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 SCAMP2O15127 329 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 SEC14L5O43304 696 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 PEX11AO75192 247 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 SPAG7O75391 227 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
YBX3-218ENST00000546298 TGM6O95932 706 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 CHRNGP07510 517 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 KRT16P08779 473 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 ATP6V1C1P21283 382 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 TBXA2RP21731 343 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 MAP3K8P41279 467 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 VSNL1P62760 191 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 MAD2L1Q13257 205 aaPredicted RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 GRAMD1BQ3KR37 738 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 LSM12Q3MHD2 195 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 ZNF385BQ569K4 471 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 CPTPQ5TA50 214 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 WDR93Q6P2C0 686 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 EXOC3L1Q86VI1 746 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 WDR75Q8IWA0 830 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 COX18Q8N8Q8 333 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 CNEP1R1Q8N9A8 125 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 FAM110BQ8TC76 370 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 AENQ8WTP8 325 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 OR5P2Q8WZ92 322 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 PIK3R3Q92569 461 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 JADE3Q92613 823 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 CHMP6Q96FZ7 201 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 STACQ99469 402 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 MECRQ9BV79 373 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 TMEM109Q9BVC6 243 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 PINK1Q9BXM7 581 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 UBQLN4Q9NRR5 601 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 DUSP22Q9NRW4 184 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 ZCCHC3Q9NUD5 404 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 CCM2LQ9NUG4 571 aaPredicted RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 PAQR5Q9NXK6 330 aaPredicted RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 GALNT8Q9NY28 637 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 ELOVL5Q9NYP7 299 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 FLRT3Q9NZU0 649 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 EIF3LQ9Y262 564 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 PHF3Q92576 2039 aaKnown RBP8.45□□□□□ -1.06
YBX3-218ENST00000546298 SPG11Q96JI7 2443 aa8.45□□□□□ -1.06
YBX3-218ENST00000546298 F8P00451 2351 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 UQCRHLA0A096LP55 91 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SH3D21A4FU49 640 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 C17orf51A8MQB3 221 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 TMEM233B4DJY2 109 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 B4DXG7 233 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 H3BML4 177 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 H3BNH8 94 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SCDO00767 359 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 CTIFO43310 598 aaKnown RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 TNFSF13O75888 250 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 KCNK2O95069 426 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SNUPNO95149 360 aaKnown RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 SLU7O95391 586 aaKnown RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 OXSR1O95747 527 aaPredicted RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 IGKV1D-16P01601 117 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 RAF1P04049 648 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 BPGMP07738 259 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 ACP2P11117 423 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 CD99P14209 185 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 ZNF17P17021 662 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PRPS1L1P21108 318 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 CD79BP40259 229 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 CCT3P49368 545 aaKnown RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 ZNF41P51814 821 aaPredicted RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 CLDN15P56746 228 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PPP2R2AP63151 447 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 POU6F2P78424 691 aaPredicted RBP8.44□□□□□ -1.06
YBX3-218ENST00000546298 KEAP1Q14145 624 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PON3Q15166 354 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 DUSP5Q16690 384 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 SPDYE7PQ495Y7 208 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 XKR7Q5GH72 579 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 C6orf136Q5SQH8 315 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 PDSS1Q5T2R2 415 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 IL23RQ5VWK5 629 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 BHLHB9Q6PI77 547 aa8.44□□□□□ -1.06
YBX3-218ENST00000546298 ZCCHC23Q6ZST2 131 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms