RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 CLDN24A6NM45 220 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 FFAR1O14842 300 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 FRS3O43559 492 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 SNAP29O95721 258 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 H1F0P07305 194 aaKnown RBP17.96■□□□□ 0.47
SKP2-208ENST00000546211 FTH1P19P0C7X4 201 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 LIMK1P53667 647 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 ATP12AP54707 1039 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 RAD23AP54725 363 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 NPTX1Q15818 432 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 MICAQ29983 383 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 RFX4Q33E94 735 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 C3orf38Q5JPI3 329 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 PDZK1Q5T2W1 519 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 MRPL2Q5T653 305 aaKnown RBP17.96■□□□□ 0.47
SKP2-208ENST00000546211 ATG16L2Q8NAA4 619 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 ZSCAN1Q8NBB4 408 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 PIK3C3Q8NEB9 887 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 CYGBQ8WWM9 190 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 TFAP2CQ92754 450 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 VMP1Q96GC9 406 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 FNDC11Q9BVV2 318 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 SEMA4CQ9C0C4 833 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.96■□□□□ 0.47
SKP2-208ENST00000546211 TMCC3Q9ULS5 477 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 A4GNTQ9UNA3 340 aa17.96■□□□□ 0.47
SKP2-208ENST00000546211 PPIEQ9UNP9 301 aaKnown RBP17.96■□□□□ 0.47
SKP2-208ENST00000546211 C9orf172C9J069 976 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 PCDH17O14917 1159 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 SEMA7AO75326 666 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 SEC24DO94855 1032 aaPredicted RBP17.96■□□□□ 0.46
SKP2-208ENST00000546211 CCNB2O95067 398 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 IL33O95760 270 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 DLGAP3O95886 979 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 IGFBP5P24593 272 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 KRT20P35900 424 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 FOLR3P41439 243 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 LIMS1P48059 325 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 NR0B1P51843 470 aaKnown RBP17.96■□□□□ 0.46
SKP2-208ENST00000546211 PSPHP78330 225 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 PIN1Q13526 163 aaPredicted RBP17.96■□□□□ 0.46
SKP2-208ENST00000546211 ZNF141Q15928 474 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 ZSWIM7Q19AV6 140 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 FGD3Q5JSP0 725 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 HSDL2Q6YN16 418 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 C17orf47Q8NEP4 570 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 OR10G2Q8NGC3 310 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 OR2Y1Q8NGV0 311 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 EFHD2Q96C19 240 aaPredicted RBP17.96■□□□□ 0.46
SKP2-208ENST00000546211 C8orf44Q96CB5 159 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 HSPBAP1Q96EW2 488 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 DHRS1Q96LJ7 313 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 CNBD2Q96M20 576 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 ALPK1Q96QP1 1244 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 WDR77Q9BQA1 342 aaPredicted RBP17.96■□□□□ 0.46
SKP2-208ENST00000546211 HOXD1Q9GZZ0 328 aa17.96■□□□□ 0.46
SKP2-208ENST00000546211 OTOGLQ3ZCN5 2332 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 SPAARA0A1B0GVQ0 90 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 CDHR4A6H8M9 788 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 TO15178 435 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 PRKNO60260 465 aaPredicted RBP17.95■□□□□ 0.46
SKP2-208ENST00000546211 KLF7O75840 302 aaPredicted RBP17.95■□□□□ 0.46
SKP2-208ENST00000546211 DKK1O94907 266 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 UMODP07911 640 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 DAPP51397 102 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 TAS2R41P59536 307 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 RNF4P78317 190 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 ZIK1Q3SY52 487 aaPredicted RBP17.95■□□□□ 0.46
SKP2-208ENST00000546211 ANKRD34AQ69YU3 496 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 RANBP3LQ86VV4 465 aaPredicted RBP17.95■□□□□ 0.46
SKP2-208ENST00000546211 MARVELD2Q8N4S9 558 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 APCDD1LQ8NCL9 501 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 OIT3Q8WWZ8 545 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 LMF1Q96S06 567 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 MCHR1Q99705 422 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 MESP1Q9BRJ9 268 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 NRSN2Q9GZP1 204 aa17.95■□□□□ 0.46
SKP2-208ENST00000546211 TMEFF2Q9UIK5 374 aaPredicted RBP17.95■□□□□ 0.46
SKP2-208ENST00000546211 LOC102723996A0A087X1L8 192 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 A0A1W2PNU3 283 aaPredicted RBP17.94■□□□□ 0.46
SKP2-208ENST00000546211 NPIPB9F8W1W9 429 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 IGHEP01854 428 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 ANXA8P13928 327 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 CDH2P19022 906 aaPredicted RBP17.94■□□□□ 0.46
SKP2-208ENST00000546211 LCN1P31025 176 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 CAPGP40121 348 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 SLC26A5P58743 744 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 FOXD4Q12950 439 aaPredicted RBP17.94■□□□□ 0.46
SKP2-208ENST00000546211 PDK3Q15120 406 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 SLC36A3Q495N2 470 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 DCST1Q5T197 706 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 KDM4DQ6B0I6 523 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 FAHD1Q6P587 224 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 OFCC1Q8IZS5 231 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 ZNF441Q8N8Z8 693 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 ZNF527Q8NB42 609 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 DIO2Q92813 273 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 TP53INP1Q96A56 240 aa17.94■□□□□ 0.46
SKP2-208ENST00000546211 NR1H4Q96RI1 486 aaPredicted RBP17.94■□□□□ 0.46
SKP2-208ENST00000546211 TOR3AQ9H497 397 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms