RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ADAMTS15Q8TE58 950 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 ASB5Q8WWX0 329 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 JADE3Q92613 823 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 RND1Q92730 232 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 ABTB1Q969K4 478 aaPredicted RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 SDCCAG3Q96C92 435 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 TEX37Q96LM6 180 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 TTYH2Q9BSA4 534 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 G6PC3Q9BUM1 346 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 TBL1XR1Q9BZK7 514 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 RTN4RQ9BZR6 473 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 UBQLN4Q9NRR5 601 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 TAS2R10Q9NYW0 307 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 PPP4R1LQ9P1A2 415 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 PCDHGB4Q9UN71 923 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 FAF1Q9UNN5 650 aaPredicted RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 SLC6A5Q9Y345 797 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 USH1CQ9Y6N9 552 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 FREM3P0C091 2139 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 MED12Q93074 2177 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 CACNA1CQ13936 2221 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 GOLGA8QA0A0J9YX86 632 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 A0A1W2PQD3 144 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 GOLGA8OA6NCC3 632 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 DUXAA6NLW8 204 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 C17orf51A8MQB3 221 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 FAM47E-STBD1D6RA91 191 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 PRSS44E7EML9 344 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 GOLGA8NF8WBI6 632 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 ZIC3O60481 467 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 TGDSO95455 350 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 OXSR1O95747 527 aaPredicted RBP10.78□□□□□ -0.68
YBX3-217ENST00000546164 ANGPTL1O95841 491 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 CPN1P15169 458 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 DPP4P27487 766 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 COL8A1P27658 744 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 HTR1EP28566 365 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 CHRNB4P30926 498 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 S100A3P33764 101 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 SOAT1P35610 550 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 DCTP40126 519 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 RFX3P48380 749 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 LRRC74AQ0VAA2 488 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 PMPCAQ10713 525 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.686e-21■■■■■ 30.4
YBX3-217ENST00000546164 CDSNQ15517 529 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 GSTA3Q16772 222 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 ACSF3Q4G176 576 aaPredicted RBP10.78□□□□□ -0.68
YBX3-217ENST00000546164 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 HIST2H2BCQ6DN03 193 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 FIGNL1Q6PIW4 674 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 EPGNQ6UW88 154 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 C6orf120Q7Z4R8 191 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 ZAR1Q86SH2 424 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 MARCH3Q86UD3 253 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 IFNEQ86WN2 208 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 OR2M3Q8NG83 312 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 OR4C3Q8NH37 302 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 OR14L1PQ8NHC6 308 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 MIPOL1Q8TD10 442 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 CDS1Q92903 461 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 WDYHV1Q96HA8 205 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 CCDC115Q96NT0 180 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 OR52B2Q96RD2 323 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 YIPF4Q9BSR8 244 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 SLCO1B3Q9NPD5 702 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 CHST11Q9NPF2 352 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 SDR39U1Q9NRG7 319 aaPredicted RBP10.78□□□□□ -0.68
YBX3-217ENST00000546164 INTS9Q9NV88 658 aaKnown RBP10.78□□□□□ -0.68
YBX3-217ENST00000546164 FBXO34Q9NWN3 711 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 BTNL2Q9UIR0 455 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 RNF6Q9Y252 685 aa10.78□□□□□ -0.68
YBX3-217ENST00000546164 PHF3Q92576 2039 aaKnown RBP10.77□□□□□ -0.68
YBX3-217ENST00000546164 PKDREJQ9NTG1 2253 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 CD8B2A6NJW9 211 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 CYSRT1A8MQ03 144 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 EPPINO95925 133 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 AK1P00568 194 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 PGRP06401 933 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 UQCRC2P22695 453 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 CHMP24386 653 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 IL12AP29459 219 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 MRPL19P49406 292 aaKnown RBP10.77□□□□□ -0.69
YBX3-217ENST00000546164 B3GALT5-AS1P59052 145 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 BCL2A1Q16548 175 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 GLYR1Q49A26 553 aaPredicted RBP10.77□□□□□ -0.69
YBX3-217ENST00000546164 DCST1Q5T197 706 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 DCST2Q5T1A1 773 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 CCNJQ5T5M9 372 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 SAXO2Q658L1 398 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 NXNQ6DKJ4 435 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 AAGABQ6PD74 315 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 ENPP6Q6UWR7 440 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 SEM1Q6ZVN7 128 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 ANKRD46Q86W74 232 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 MISPQ8IVT2 679 aa10.77□□□□□ -0.69
YBX3-217ENST00000546164 CHDHQ8NE62 594 aaPredicted RBP10.77□□□□□ -0.69
YBX3-217ENST00000546164 OR4A15Q8NGL6 344 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms