RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 TMEM156Q8N614 296 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 OR4N2Q8NGD1 307 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 DTNBP1Q96EV8 351 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 NAF1Q96HR8 494 aaKnown RBP14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 YY1AP1Q9H869 796 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 CNIH4Q9P003 139 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 PACSIN3Q9UKS6 424 aa14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 PCDHGA9Q9Y5G4 932 aaKnown RBP14.74□□□□□ -0.05
PRPF40A-212ENST00000545856 TCRBV3S1A0A5B6 114 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ANKRD33BA6NCL7 494 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ALG1L2C9J202 215 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 M0QX08 132 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 FCMRO60667 390 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ITGB2P05107 769 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 IL7RP16871 459 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ATP6V1B2P21281 511 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 PSMA4P25789 261 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 HLCSP50747 726 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 MFAP5Q13361 173 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 NNATQ16517 81 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ZNF791Q3KP31 576 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 LRRC23Q53EV4 343 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 CYBRD1Q53TN4 286 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 FIGNL1Q6PIW4 674 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 LYPD8Q6UX82 237 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ZNF440Q8IYI8 595 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 KDF1Q8NAX2 398 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 OR52P1PQ8NH57 321 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 WDR60Q8WVS4 1066 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 APOBEC4Q8WW27 367 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 TM9SF4Q92544 642 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 OTUB1Q96FW1 271 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ADOQ96SZ5 270 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 DOHHQ9BU89 302 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 CDCP1Q9H5V8 836 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 WDR70Q9NW82 654 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 SLC13A4Q9UKG4 626 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 MKLN1Q9UL63 735 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 USP22Q9UPT9 525 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 DTNAQ9Y4J8 743 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 KCNMB2Q9Y691 235 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ACACBO00763 2458 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 A8MUI8 341 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 FKBP6O75344 327 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 NME6O75414 186 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 GCM2O75603 506 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 UGT2B17O75795 530 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 SERPINA1P01009 418 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 IGKV1D-16P01601 117 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 CELA2AP08217 269 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 PRKAR1AP10644 381 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 KCNJ5P48544 419 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 CYB561P49447 251 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 KCNC4Q03721 635 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 FGFBP1Q14512 234 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 GPR68Q15743 365 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 FAM98BQ52LJ0 330 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 KLHL26Q53HC5 615 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ZNF311Q5JNZ3 666 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 CCNJQ5T5M9 372 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 AAGABQ6PD74 315 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 IGFL2Q6UWQ7 119 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 RTL4Q6ZR62 310 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 TOR1AIP2Q8NFQ8 470 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 THAP3Q8WTV1 239 aaPredicted RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 GEMIN6Q8WXD5 167 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 NR4A3Q92570 626 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 HGDQ93099 445 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 TAMM41Q96BW9 452 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 POLR2J2Q9GZM3 115 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 POLR2J3Q9H1A7 115 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 EXOSC3Q9NQT5 275 aaKnown RBP14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 SDHAF3Q9NRP4 125 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 HPF1Q9NWY4 346 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 SLC9A8Q9Y2E8 581 aa14.73□□□□□ -0.05
PRPF40A-212ENST00000545856 ZFHX4Q86UP3 3567 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 CACNA1GO43497 2377 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 TCRBV5S2A0A599 114 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 DHRS12A0PJE2 317 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 H0YHG0 523 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 UGT2B11O75310 529 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 UTS2O95399 124 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 ZIC2O95409 532 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 OXSR1O95747 527 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 CYP4B1P13584 511 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 NCK1P16333 377 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 AQP1P29972 269 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 SOX3P41225 446 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 SRSF6Q13247 344 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 SLC30A6Q6NXT4 461 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 SPATA24Q86W54 205 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 PAQR8Q8TEZ7 354 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 ZCCHC14Q8WYQ9 949 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 PROX1Q92786 737 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 EFHD2Q96C19 240 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 PYURFQ96I23 114 aa14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 UTP23Q9BRU9 249 aaKnown RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 DENND2DQ9H6A0 471 aaPredicted RBP14.72□□□□□ -0.05
PRPF40A-212ENST00000545856 CPNE5Q9HCH3 593 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms