RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ATP12AP54707 1039 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PLGLB1Q02325 96 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TYW3Q6IPR3 259 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RPUSD3Q6P087 351 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TMEM81Q6P7N7 255 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 LRRC74BQ6ZQY2 392 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 POGLUT1Q8NBL1 392 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GPATCH1Q9BRR8 931 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NDE1Q9NXR1 346 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ANAPC2Q9UJX6 822 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BOKQ9UMX3 212 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FADS1O60427 444 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 UBOX5O94941 541 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ARAFP10398 606 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TBXA2RP21731 343 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RFC3P40938 356 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PTGDSP41222 190 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC7A2P52569 658 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PSME3P61289 254 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CDK6Q00534 326 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PMP22Q01453 160 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CHRNEQ04844 493 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SCARB2Q14108 478 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 INAQ16352 499 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF630Q2M218 657 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RPS26P11Q5JNZ5 115 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FRRS1Q6ZNA5 592 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SERPINA11Q86U17 422 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MARCH3Q86UD3 253 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NFKBIDQ8NI38 313 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF597Q96LX8 424 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TMEM38AQ9H6F2 299 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PROK2Q9HC23 129 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TUBA8Q9NY65 449 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 WIF1Q9Y5W5 379 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ITPR1Q14643 2758 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BSNQ9UPA5 3926 aa13.25□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PINLYPA6NC86 204 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 B2RBV5 119 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NDUFB5O43674 189 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KIAA0513O60268 411 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SORBS2O94875 1100 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NGFRP08138 427 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC25A3Q00325 362 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MAPK11Q15759 364 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PDZK1Q5T2W1 519 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C8orf82Q6P1X6 216 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FAM180AQ6UWF9 173 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C16orf89Q6UX73 402 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HMGN2P46Q86SG4 172 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 IFNEQ86WN2 208 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC15A3Q8IY34 581 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PGAM4Q8N0Y7 254 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CISD2Q8N5K1 135 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GATSQ8NAP1 163 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C11orf65Q8NCR3 313 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR1J4Q8NGS1 313 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FBXO27Q8NI29 283 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TREX2Q9BQ50 279 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SPATA9Q9BWV2 254 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SAP130Q9H0E3 1048 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 QRSL1Q9H0R6 528 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC38A1Q9H2H9 487 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MTHFD2LQ9H903 347 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SPAG4Q9NPE6 437 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CMTM6Q9NX76 183 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ADA2Q9NZK5 511 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PPP4R1LQ9P1A2 415 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ANGPT4Q9Y264 503 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 AP3M1Q9Y2T2 418 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 DTNAQ9Y4J8 743 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PIEZO2Q9H5I5 2752 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NBEAQ8NFP9 2946 aa13.24□□□□□ -0.29
TNFRSF1A-216ENST00000543995 A0A0G2JPF8 293 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HNRNPCL2B2RXH8 293 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HNRNPCL3B7ZW38 293 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ALG1L2C9J202 215 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 H3BNH8 94 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ACOT7O00154 380 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GNB5O14775 395 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HNRNPCL1O60812 293 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 UGT2B17O75795 530 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ANGPTL1O95841 491 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PRB1P04280 392 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GUSBP08236 651 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HNRNPCL4P0DMR1 293 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 T-ENOLP0DO92 83 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF24P17028 368 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RNF144AP50876 292 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RBBP4Q09028 425 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ADRM1Q16186 407 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR5M10Q6IEU7 315 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms