RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CBLCQ9ULV8 474 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 PCDHGA6Q9Y5G7 932 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 PCDHGA10Q9Y5H3 936 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 VPS13AQ96RL7 3174 aa18.36■□□□□ 0.53
COPS7A-218ENST00000543939 NPIPB9F8W1W9 429 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 HBQ1P09105 142 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 FGF5P12034 268 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 CRHBPP24387 322 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 CSTF2P33240 577 aaKnown RBP eCLIP18.35■□□□□ 0.53
COPS7A-218ENST00000543939 GGT2P36268 569 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 RFX3P48380 749 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 HLCSP50747 726 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 ST3GAL3Q11203 375 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 TRAM2Q15035 370 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 FOXB2Q5VYV0 432 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 Q6ZPB1 254 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-218ENST00000543939 BCORP1Q8N888 145 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 G6PC3Q9BUM1 346 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 OR8D2Q9GZM6 311 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 FTSJ1Q9UET6 329 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 NTNG1Q9Y2I2 539 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 COL27A1Q8IZC6 1860 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-218ENST00000543939 SYNDIG1LA6NDD5 238 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 EFCAB7A8K855 629 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 FLRT2O43155 660 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 OR5F1O95221 314 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 ZGLP1P0C6A0 271 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 AGXTP21549 392 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 UGT2B15P54855 530 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 NUP107P57740 925 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 PLAURQ03405 335 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 TOP3AQ13472 1001 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-218ENST00000543939 ZNF141Q15928 474 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 NNATQ16517 81 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 PLEKHM3Q6ZWE6 761 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 OR4K5Q8NGD3 323 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 OR14A16Q8NHC5 309 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 CNIH3Q8TBE1 160 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 ADAMTS16Q8TE57 1224 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 UCK2Q9BZX2 261 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 FAM192AQ9GZU8 254 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 ADNPQ9H2P0 1102 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 ARMC7Q9H6L4 198 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 EVA1AQ9H8M9 152 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 REV1Q9UBZ9 1251 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 CFL2Q9Y281 166 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 OR10H1Q9Y4A9 318 aa18.35■□□□□ 0.53
COPS7A-218ENST00000543939 BCAS1O75363 584 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 THY1P04216 161 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 IFNA8P32881 189 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 PPICP45877 212 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 ESRRGP62508 458 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 DCDP81605 110 aaKnown RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 OCA2Q04671 838 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 IL11RAQ14626 422 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 MAD2L1BPQ15013 274 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 PDZK1Q5T2W1 519 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 SATL1Q86VE3 508 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 RANBP3LQ86VV4 465 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 BMPERQ8N8U9 685 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 RHBDD1Q8TEB9 315 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 DAZLQ92904 295 aaKnown RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 SLC38A4Q969I6 547 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 ART5Q96L15 291 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 NUDT9Q9BW91 350 aa18.34■□□□□ 0.53
COPS7A-218ENST00000543939 POLR2J2Q9GZM3 115 aaKnown RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 POLR2J3Q9H1A7 115 aaKnown RBP18.34■□□□□ 0.53
COPS7A-218ENST00000543939 A0A087WUU8 490 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 GALR2O43603 387 aaPredicted RBP18.33■□□□□ 0.52
COPS7A-218ENST00000543939 PRG2P13727 222 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 DRD5P21918 477 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 ALDH3B2P48448 385 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 RNF144AP50876 292 aaPredicted RBP18.33■□□□□ 0.52
COPS7A-218ENST00000543939 CRISP1P54107 249 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 TARDBPQ13148 414 aaKnown RBP eCLIP18.33■□□□□ 0.52
COPS7A-218ENST00000543939 NADK2Q4G0N4 442 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 C1orf94Q6P1W5 598 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 CD300LDQ6UXZ3 194 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 GDF7Q7Z4P5 450 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 ZER1Q7Z7L7 766 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 AGBL5Q8NDL9 886 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 ZNF566Q969W8 418 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 SLC41A3Q96GZ6 507 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 C14orf105Q9NVL8 296 aa18.33■□□□□ 0.52
COPS7A-218ENST00000543939 SLC1A7O00341 560 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 FMO6PO60774 539 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 GKN3PP0CG01 181 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 OSMP13725 252 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 MMP11P24347 488 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 CHMP24386 653 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 HTR2AP28223 471 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 ATP12AP54707 1039 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 PSMD4P55036 377 aaKnown RBP18.32■□□□□ 0.52
COPS7A-218ENST00000543939 LSM11P83369 360 aaKnown RBP eCLIP18.32■□□□□ 0.52
COPS7A-218ENST00000543939 LAIR1Q6GTX8 287 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 SHISA6Q6ZSJ9 500 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 LANCL3Q6ZV70 420 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 OVCH1Q7RTY7 1134 aa18.32■□□□□ 0.52
COPS7A-218ENST00000543939 GRAMD2AQ8IUY3 354 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms