RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.39
PPME1-208ENST00000543525 DZANK1Q9NVP4 752 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 ASB6Q9NWX5 421 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 PTGFRNQ9P2B2 879 aa12.58□□□□□ -0.39
PPME1-208ENST00000543525 TBC1D3DA0A087WVF3 549 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D3IA0A087WXS9 549 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D3EA0A087X179 549 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 PRSS38A1L453 326 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D3LB9A6J9 549 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 SCAMP1O15126 338 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 PIP5K1CO60331 668 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 HCN1O60741 890 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 IGHA1P01876 353 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.44e-7■■■■■ 29.2
PPME1-208ENST00000543525 MAT2AP31153 395 aaKnown RBP12.58□□□□□ -0.4
PPME1-208ENST00000543525 TLX1P31314 330 aaPredicted RBP12.58□□□□□ -0.4
PPME1-208ENST00000543525 CD79BP40259 229 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TNFRSF4P43489 277 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 SEC13P55735 322 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 SF3B4Q15427 424 aaKnown RBP eCLIP12.58□□□□□ -0.42e-7■■■□□ 14.8
PPME1-208ENST00000543525 TBC1D3CQ6IPX1 549 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 RANBP3LQ86VV4 465 aaPredicted RBP12.58□□□□□ -0.4
PPME1-208ENST00000543525 GID4Q8IVV7 300 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D3Q8IZP1 549 aaPredicted RBP12.58□□□□□ -0.4
PPME1-208ENST00000543525 RDH10Q8IZV5 341 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 VWA5B2Q8N398 1253 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TMEM255BQ8WV15 326 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 DEPDC7Q96QD5 511 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TP63Q9H3D4 680 aaPredicted RBP12.58□□□□□ -0.4
PPME1-208ENST00000543525 SRMSQ9H3Y6 488 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 FGF22Q9HCT0 170 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 TNFRSF10DQ9UBN6 386 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 KLF15Q9UIH9 416 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 CBLCQ9ULV8 474 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 SLC7A7Q9UM01 511 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 MYO10Q9HD67 2058 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
PPME1-208ENST00000543525 URADA6NGE7 173 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 UNC119BA6NIH7 251 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 BTN3A3O00478 584 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 RGS13O14921 159 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 B3GALT2O43825 422 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 THY1P04216 161 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 THBS1P07996 1170 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 S100A1P23297 94 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 CFL1P23528 166 aaKnown RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 GDI1P31150 447 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 SOX18P35713 384 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 IFITM2Q01629 132 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 ZNF155Q12901 538 aaPredicted RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 ZFP69Q49AA0 526 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 SLC35F1Q5T1Q4 408 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 CXXC5Q7LFL8 322 aaKnown RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 OR2L13Q8N349 312 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 SPRYD4Q8WW59 207 aaPredicted RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 SAMD8Q96LT4 415 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 RIPOR3Q96MK2 946 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 SNX18Q96RF0 628 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 TMED9Q9BVK6 235 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 C6orf106Q9H6K1 298 aaPredicted RBP12.57□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D17Q9HA65 648 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 PRDM9Q9NQV7 894 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 COMMD3Q9UBI1 195 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 TBC1D29Q9UFV1 150 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 ADAM30Q9UKF2 790 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
PPME1-208ENST00000543525 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 TRAPPC13A5PLN9 417 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 FAM172BPA6NC97 362 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 GABRPO00591 440 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 SLC31A1O15431 190 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 LRRTM2O43300 516 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 CELP19835 753 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 ZNF10P21506 573 aaPredicted RBP12.56□□□□□ -0.4
PPME1-208ENST00000543525 GALP22466 123 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 SOX9P48436 509 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 ADPRHP54922 357 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 KIAA1024LP59773 190 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 EEF1A1P68104 462 aaKnown RBP12.56□□□□□ -0.4
PPME1-208ENST00000543525 DUSP8Q13202 625 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 TRIQKQ629K1 86 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 GALNT12Q8IXK2 581 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 C19orf18Q8NEA5 215 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 BRIX1Q8TDN6 353 aaKnown RBP12.56□□□□□ -0.4
PPME1-208ENST00000543525 TM4SF19Q96DZ7 209 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 ST6GAL2Q96JF0 529 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 SECISBP2Q96T21 854 aaKnown RBP12.56□□□□□ -0.4
PPME1-208ENST00000543525 KXD1Q9BQD3 176 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 MMP28Q9H239 520 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 KCMF1Q9P0J7 381 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 POLHQ9Y253 713 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 EYSQ5T1H1 3165 aa12.56□□□□□ -0.4
PPME1-208ENST00000543525 CENPXA8MT69 81 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms