RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SERINC1Q9NRX5 453 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 GLRX2Q9NS18 164 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 INTS9Q9NV88 658 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 THAP1Q9NVV9 213 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 CTSFQ9UBX1 484 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ZDHHC2Q9UIJ5 367 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ANAPC2Q9UJX6 822 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SPACA6W5XKT8 324 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SDK2Q58EX2 2172 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 IGLV3-12A0A075B6K2 115 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ZC3H12DA2A288 527 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ZNF503-AS2A6NEH8 195 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 VSTM2BA6NLU5 285 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SLC28A1O00337 649 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 PLPP1O14494 284 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CNOT3O75175 753 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 DNAJB6O75190 326 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 KLF7O75840 302 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 MYO1DO94832 1006 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 BMP10O95393 424 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 IGHEP01854 428 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 KLK1P06870 262 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 FHP07954 510 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 LINC00032P0C843 101 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 PRKAR1AP10644 381 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 PRG2P13727 222 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 GABRB1P18505 474 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CPN2P22792 545 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 JAK1P23458 1154 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 OTX2P32243 289 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CENPAP49450 140 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 HTR6P50406 440 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 RPL14P50914 215 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 EMP2P54851 167 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 LIM2P55344 173 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 RAB38P57729 211 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CXADRP78310 365 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 HMGCS1Q01581 520 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 KLC1Q07866 573 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 BST1Q10588 318 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SLAMF1Q13291 335 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 RUNX2Q13950 521 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SOWAHCQ53LP3 525 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SPIN4Q56A73 249 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CCNYL2Q5T2Q4 361 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 FAM69BQ5VUD6 431 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ZNF793Q6ZN11 406 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 RAB43Q86YS6 212 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CDH26Q8IXH8 852 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 FAM185AQ8N0U4 392 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 PQLC1Q8N2U9 271 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 METTL4Q8N3J2 472 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ZCCHC7Q8N3Z6 543 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ARFGAP2Q8N6H7 521 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ZNF781Q8N8C0 355 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 OR2Y1Q8NGV0 311 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 LRRC8CQ8TDW0 803 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 TWIST2Q8WVJ9 160 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 METTL21AQ8WXB1 218 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 GIMAP5Q96F15 307 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 MRPL1Q9BYD6 325 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 DDX31Q9H8H2 851 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CPNE5Q9HCH3 593 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 LYRM4Q9HD34 91 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 TCF7L2Q9NQB0 619 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 BEX4Q9NWD9 120 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 LYARQ9NX58 379 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 P4HTMQ9NXG6 502 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 C3orf18Q9UK00 162 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ADAM29Q9UKF5 820 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 FBXW2Q9UKT8 454 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 MKLN1Q9UL63 735 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 MRPS33Q9Y291 106 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 RAP2CQ9Y3L5 183 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 DNAJC15Q9Y5T4 150 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 MDC1Q14676 2089 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SPTBP11277 2137 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 A0A0A6YYD5 115 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 A0A0A6YYJ9 748 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 GNG14A0A1W2PPG7 69 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ENO4A6NNW6 628 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 IFNL4K9M1U5 179 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CLDN4O14493 209 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 KLF11O14901 512 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ADAMDEC1O15204 470 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 NKX2-8O15522 239 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 B4GALT2O60909 372 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SNNO75324 88 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 GUCY1B2O75343 617 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 EEDO75530 441 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 JRKO75564 520 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 CDC123O75794 336 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 RSL1D1O76021 490 aaKnown RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 SCELO95171 688 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 GBAP04062 536 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ALPPP05187 535 aa4.75□□□□□ -1.65
CLIP1-217ENST00000543205 ABCB1P08183 1280 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-217ENST00000543205 FAM58BPP0C7Q3 252 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms