RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 A0A1W2PS29 197 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 ZC3H12DA2A288 527 aaKnown RBP12.08□□□□□ -0.48
DDX11-223ENST00000542838 BTN3A3O00478 584 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 CLEC3AO75596 197 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 HMGN1P05114 100 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 AHRP35869 848 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 RFX3P48380 749 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 SRP9P49458 86 aaKnown RBP12.08□□□□□ -0.48
DDX11-223ENST00000542838 COL9A2Q14055 689 aaPredicted RBP12.08□□□□□ -0.48
DDX11-223ENST00000542838 PRAMEF8Q5VWM4 474 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 PRAMEF7Q5VXH5 474 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 CNKSR3Q6P9H4 555 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 ACBD7Q8N6N7 88 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 OR8K5Q8NH50 307 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 GPR137Q96N19 417 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 DHRS9Q9BPW9 319 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 MENTQ9BUN1 341 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 PITHD1Q9GZP4 211 aaPredicted RBP12.08□□□□□ -0.48
DDX11-223ENST00000542838 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 MARK1Q9P0L2 795 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 RASD1Q9Y272 281 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 HCFC2Q9Y5Z7 792 aa12.08□□□□□ -0.48
DDX11-223ENST00000542838 A0A1W2PR48 441 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 MOSPD3O75425 235 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 CXCL14O95715 111 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 NDUFV2P19404 249 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 RBMS1P29558 406 aaKnown RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 GCGRP47871 477 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 EPHA5P54756 1037 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 PER3P56645 1201 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 PRR5P85299 388 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 BDH1Q02338 343 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ARHGAP15Q53QZ3 475 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 CDC73Q6P1J9 531 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 PLBD1Q6P4A8 553 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 C16orf62Q7Z3J2 963 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 GDF7Q7Z4P5 450 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 LINC01555Q8NAE3 123 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 NUP43Q8NFH3 380 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 OR11H7Q8NGC8 314 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 SLC41A3Q96GZ6 507 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 RANBP3Q9H6Z4 567 aaPredicted RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 MED20Q9H944 212 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 MRPL39Q9NYK5 338 aaKnown RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 PRKAG2Q9UGJ0 569 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ATG4BQ9Y4P1 393 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 NUMA1Q14980 2115 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 EMC8O43402 210 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 THY1P04216 161 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ADRB3P13945 408 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 BTCP35070 178 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 AP2S1P53680 142 aaPredicted RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 FAM27D1Q5T7N8 215 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 MBOAT2Q6ZWT7 520 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 OAFQ86UD1 273 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 LRRTM4Q86VH4 590 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 FAM20CQ8IXL6 584 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 SLC38A6Q8IZM9 456 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 OR8H3Q8N146 312 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ZNF655Q8N720 491 aaPredicted RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 TMEM99Q8N816 258 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 SCMH1Q96GD3 660 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 JAM3Q9BX67 310 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDX11-223ENST00000542838 DPAGT1Q9H3H5 408 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 POLMQ9NP87 494 aaPredicted RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 ELF5Q9UKW6 265 aaPredicted RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 SATB2Q9UPW6 733 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 C4orf51C9J302 202 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 CDC42EP2O14613 210 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ERI3O43414 337 aaKnown RBP12.07□□□□□ -0.48
DDX11-223ENST00000542838 SLC22A5O76082 557 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 MC3RP41968 323 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 OR10A3P58181 314 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 TOR2AQ5JU69 321 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 C6orf132Q5T0Z8 1188 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 C18orf63Q68DL7 685 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 SFXN4Q6P4A7 337 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ARL9Q6T311 187 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 TEX261Q6UWH6 196 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 MOAP1Q96BY2 351 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 EMC7Q9NPA0 242 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 ZFP64Q9NPA5 681 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 U3KQ87 197 aa12.07□□□□□ -0.48
DDX11-223ENST00000542838 LOC105371267A0A1B0GV96 52 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 DAPL1A0PJW8 107 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 C7orf66A4D0T2 115 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 J3QRE1 110 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 SHOXO15266 292 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 KLF4O43474 513 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 FGF18O76093 207 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 ADH1AP07327 375 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 CSNK2A2P19784 350 aaPredicted RBP12.06□□□□□ -0.48
DDX11-223ENST00000542838 NPR2P20594 1047 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 THBS2P35442 1172 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 CLCNKAP51800 687 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
DDX11-223ENST00000542838 GID4Q8IVV7 300 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms