RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 LAPTM4BQ86VI4 370 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 COMTD1Q86VU5 262 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PACRGLQ8N7B6 248 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 POC5Q8NA72 575 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PROX1Q92786 737 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 NRBF2Q96F24 287 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 CMKLR1Q99788 373 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 LRFN3Q9BTN0 628 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 VN1R1Q9GZP7 353 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 SMURF2Q9HAU4 748 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PARD6AQ9NPB6 346 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 FBXO8Q9NRD0 319 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 IGLV3-12A0A075B6K2 115 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 TCRBV16S1A1N1A0A5B0 115 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 G3V2T6 193 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 RFPL3O75679 317 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 INMTO95050 263 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 CYP4B1P13584 511 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ITGA2P17301 1181 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 AGXTP21549 392 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 S100A1P23297 94 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 GABRA3P34903 492 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 RORAP35398 523 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 MAP3K8P41279 467 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 KCNJ5P48544 419 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 EFNA3P52797 238 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ARHGAP11BQ3KRB8 267 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ZNF385CQ66K41 422 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 SPATC1Q76KD6 591 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ZDHHC13Q8IUH4 622 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 TMEM151BQ8IW70 566 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 PTPMT1Q8WUK0 201 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 APOBEC4Q8WW27 367 aaKnown RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 PIK3R3Q92569 461 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 CITED4Q96RK1 184 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 QRSL1Q9H0R6 528 aaKnown RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 OR10A5Q9H207 317 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 FOLH1BQ9HBA9 442 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 C8orf4Q9NR00 106 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 C14orf105Q9NVL8 296 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SATB2Q9UPW6 733 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 CLCA3PQ9Y6N3 262 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 DSPPQ9NZW4 1301 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ZFHX2Q9C0A1 2572 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 A8MUA0 341 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 MEN1O00255 615 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 CCRL2O00421 344 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 XPNPEP2O43895 674 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 FCMRO60667 390 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SOX30O94993 753 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 NKX2-2O95096 273 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 AK1P00568 194 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 IFNW1P05000 195 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ALPPP05187 535 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ZGLP1P0C6A0 271 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 PSMB9P28065 219 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 GTF2E2P29084 291 aaKnown RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 KCNC4Q03721 635 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 AQP6Q13520 282 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 ELAVL1Q15717 326 aaKnown RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 DCST2Q5T1A1 773 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SHISA6Q6ZSJ9 500 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SVOPLQ8N434 492 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 PLPP5Q8NEB5 264 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 HOXB13Q92826 284 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 SENP5Q96HI0 755 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 ZNF354BQ96LW1 612 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 VSTM2LQ96N03 204 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SDF2Q99470 211 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 LMF2Q9BU23 707 aaKnown RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 FUNDC2Q9BWH2 189 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 AMBRA1Q9C0C7 1298 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 STRADBQ9C0K7 418 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 C6orf62Q9GZU0 229 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 THSD1Q9NS62 852 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SMPD3Q9NY59 655 aaPredicted RBP8.06□□□□□ -1.12
THBS3-210ENST00000541576 WDR45Q9Y484 360 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 PCDHGA8Q9Y5G5 932 aa8.06□□□□□ -1.12
THBS3-210ENST00000541576 SYNDIG1LA6NDD5 238 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 B4E171 279 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 J3KTA2 159 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 SNPHO15079 494 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 ONECUT2O95948 504 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 ALPLP05186 524 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 NAT1P18440 290 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 TSPAN7P41732 249 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 POU6F2P78424 691 aaPredicted RBP8.05□□□□□ -1.12
THBS3-210ENST00000541576 INSM1Q01101 510 aaPredicted RBP8.05□□□□□ -1.12
THBS3-210ENST00000541576 SELENBP1Q13228 472 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 CCNJQ5T5M9 372 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 DHRS4L2Q6PKH6 230 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 FRRS1Q6ZNA5 592 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 OVCH1Q7RTY7 1134 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 CHDHQ8NE62 594 aaPredicted RBP8.05□□□□□ -1.12
THBS3-210ENST00000541576 OR7G1Q8NGA0 311 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 OR4D11Q8NGI4 311 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 OR5K1Q8NHB7 308 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 C16orf52Q8NHV5 167 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 NDNFQ8TB73 568 aa8.05□□□□□ -1.12
THBS3-210ENST00000541576 SH3YL1Q96HL8 342 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms