RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NET1Q7Z628 596 aaPredicted RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 GALNT10Q86SR1 603 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 IFNEQ86WN2 208 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 CALHM3Q86XJ0 350 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 HPS6Q86YV9 775 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 C10orf111Q8N326 155 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ZADH2Q8N4Q0 377 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 OR5M3Q8NGP4 307 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 SLC38A5Q8WUX1 472 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 TTC9Q92623 222 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 MAL2Q969L2 176 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ABHD17AQ96GS6 310 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ZNF583Q96ND8 569 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 BTBD10Q9BSF8 475 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ADNPQ9H2P0 1102 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 TRIM45Q9H8W5 580 aaPredicted RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 ANKRD10Q9NXR5 420 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 LRFN1Q9P244 771 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 TUBD1Q9UJT1 453 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 WDR45Q9Y484 360 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 NME4O00746 187 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 UGT2B11O75310 529 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 H6PDO95479 791 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 IGKV1D-16P01601 117 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 GUSBP08236 651 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 FBXW4P57775 412 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 CDK6Q00534 326 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 SCARB2Q14108 478 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 LINC00303Q3SY05 128 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 FLYWCH1Q4VC44 716 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 SAMD4BQ5PRF9 694 aaKnown RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 REEP3Q6NUK4 255 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 BNC2Q6ZN30 1099 aaPredicted RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 RTL4Q6ZR62 310 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 SLC30A8Q8IWU4 369 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ARHGAP24Q8N264 748 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ANKFN1Q8N957 763 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 GOLM1Q8NBJ4 401 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 OR2T12Q8NG77 320 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 DNAJC9Q8WXX5 260 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 SLC7A6OSQ96CW6 309 aaPredicted RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 TMEM19Q96HH6 336 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 REXO5Q96IC2 774 aaKnown RBP14.19□□□□□ -0.14
DDB1-216ENST00000539739 ZNF350Q9GZX5 532 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 HOXD1Q9GZZ0 328 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDB1-216ENST00000539739 ALG2Q9H553 416 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 ANGPT4Q9Y264 503 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 LOC400499M0QZD8 3231 aa14.19□□□□□ -0.14
DDB1-216ENST00000539739 PRAMEF27A3QJZ7 478 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 FAM220BPB1ANY3 271 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 F10P00742 488 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 HPGDP15428 266 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 GZMMP51124 257 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 FUT5Q11128 374 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 OR1C1Q15619 314 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 VMACQ2NL98 169 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 SPATS1Q496A3 300 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 PRAMEF8Q5VWM4 474 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 PRAMEF7Q5VXH5 474 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 SLC22A10Q63ZE4 541 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 IGFL3Q6UXB1 125 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 PTOV1Q86YD1 416 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 ZZZ3Q8IYH5 903 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 HIPK4Q8NE63 616 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 TNIP2Q8NFZ5 429 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 NFKBIDQ8NI38 313 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 PMM1Q92871 262 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 SECISBP2Q96T21 854 aaKnown RBP14.18□□□□□ -0.14
DDB1-216ENST00000539739 KCTD14Q9BQ13 255 aaPredicted RBP14.18□□□□□ -0.14
DDB1-216ENST00000539739 CACYBPQ9HB71 228 aaKnown RBP14.18□□□□□ -0.14
DDB1-216ENST00000539739 TIMMDC1Q9NPL8 285 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 FBXO34Q9NWN3 711 aa14.18□□□□□ -0.14
DDB1-216ENST00000539739 PRPF19Q9UMS4 504 aaKnown RBP14.18□□□□□ -0.14
DDB1-216ENST00000539739 CACNA1GO43497 2377 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 MGAQ8IWI9 3026 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 A0A0G2JPF8 293 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 ELOVL7A1L3X0 281 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 HTR3EA5X5Y0 456 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 HNRNPCL2B2RXH8 293 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 HNRNPCL3B7ZW38 293 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 UTS2O95399 124 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 CHRM4P08173 479 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 FAM87AP0C7U9 286 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 HNRNPCL4P0DMR1 293 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 CYP4B1P13584 511 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 CLK3P49761 638 aaKnown RBP14.17□□□□□ -0.14
DDB1-216ENST00000539739 GSK3BP49841 420 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 NCALDP61601 193 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 CHRNEQ04844 493 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 GPR68Q15743 365 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 INTS11Q5TA45 600 aaKnown RBP14.17□□□□□ -0.14
DDB1-216ENST00000539739 SPINK14Q6IE38 97 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 FRRS1Q6ZNA5 592 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 ZNF527Q8NB42 609 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 OR10G3Q8NGC4 313 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 C9orf43Q8TAL5 461 aaPredicted RBP14.17□□□□□ -0.14
DDB1-216ENST00000539739 BBS10Q8TAM1 723 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 HGDQ93099 445 aa14.17□□□□□ -0.14
DDB1-216ENST00000539739 SAP130Q9H0E3 1048 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms