RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 KLHL28Q9NXS3 571 aa14.9□□□□□ -0.02
TRAF3-204ENST00000539721 SLC9A8Q9Y2E8 581 aa14.9□□□□□ -0.02
TRAF3-204ENST00000539721 PRAMEF25A6NGN4 478 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 TMEM200CA6NKL6 621 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 GNGT2O14610 69 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 TSPAN2O60636 221 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 DIRAS1O95057 198 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 EPPINO95925 133 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 ICAM2P13598 275 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 NID1P14543 1247 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 LIFP15018 202 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 RNF144AP50876 292 aaPredicted RBP14.89□□□□□ -0.03
TRAF3-204ENST00000539721 ATP1A4Q13733 1029 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 ZNF141Q15928 474 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 TCTN3Q6NUS6 607 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 ICA1LQ8NDH6 482 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 ADAMTS17Q8TE56 1095 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 APOBEC4Q8WW27 367 aaKnown RBP14.89□□□□□ -0.03
TRAF3-204ENST00000539721 CENPNQ96H22 339 aaPredicted RBP14.89□□□□□ -0.03
TRAF3-204ENST00000539721 BDH2Q9BUT1 245 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 AMBRA1Q9C0C7 1298 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 HOXD1Q9GZZ0 328 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 MYOTQ9UBF9 498 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 DNAJB9Q9UBS3 223 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 NPFFR2Q9Y5X5 522 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 EXPH5Q8NEV8 1989 aa14.89□□□□□ -0.03
TRAF3-204ENST00000539721 CLDN24A6NM45 220 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 NPIPB9F8W1W9 429 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 M0R3H8 397 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 MASP2O00187 686 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 HS6ST1O60243 411 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 UTS2O95399 124 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 CYP4B1P13584 511 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ITGA2P17301 1181 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 LCN1P31025 176 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 PTDSS1P48651 473 aaKnown RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 EEF1A1P68104 462 aaKnown RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 RNF220Q5VTB9 566 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 VASH2Q86V25 355 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 CLIP4Q8N3C7 705 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 SLC22A8Q8TCC7 542 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 NRG4Q8WWG1 115 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 IP6K3Q96PC2 410 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ARHGDIGQ99819 225 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ARMC7Q9H6L4 198 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 NDUFAF4Q9P032 175 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 CHST2Q9Y4C5 530 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 CASQ2O14958 399 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ABCB7O75027 752 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 NADKO95544 446 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ITGAMP11215 1152 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 PNLIPRP2P54317 469 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 NRF1Q16656 503 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 GRAMD1BQ3KR37 738 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 TBC1D25Q3MII6 688 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 IQCCQ4KMZ1 466 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 MRPL2Q5T653 305 aaKnown RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 LPCAT4Q643R3 524 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 DEF8Q6ZN54 512 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 TSEN54Q7Z6J9 526 aaKnown RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 LACC1Q8IV20 430 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ZNF527Q8NB42 609 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 OR4D11Q8NGI4 311 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 OR4C3Q8NH37 302 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ZNF300Q96RE9 604 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ZNF347Q96SE7 839 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 WFDC6Q9BQY6 131 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 UBQLN4Q9NRR5 601 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 RLIMQ9NVW2 624 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 FLRT3Q9NZU0 649 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 FAM32AQ9Y421 112 aaKnown RBP14.88□□□□□ -0.03
TRAF3-204ENST00000539721 ENPP4Q9Y6X5 453 aa14.88□□□□□ -0.03
TRAF3-204ENST00000539721 CFAP54Q96N23 3096 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 FRS3O43559 492 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 ICOSLGO75144 302 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 PPM1BO75688 479 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 OR2J2O76002 312 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 HPGDP15428 266 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 SPINK2P20155 84 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 PEX2P28328 305 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 YAP1P46937 504 aaKnown RBP14.87□□□□□ -0.03
TRAF3-204ENST00000539721 LRRC36Q1X8D7 754 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 OR2T5Q6IEZ7 315 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 RBM45Q8IUH3 476 aaKnown RBP14.87□□□□□ -0.03
TRAF3-204ENST00000539721 OR2T29Q8NH02 315 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 SCNM1Q9BWG6 230 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 ZBTB20Q9HC78 741 aaPredicted RBP14.87□□□□□ -0.03
TRAF3-204ENST00000539721 DTNAQ9Y4J8 743 aa14.87□□□□□ -0.03
TRAF3-204ENST00000539721 CDHR4A6H8M9 788 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 OR6C70A6NIJ9 312 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 SAC3D1A6NKF1 404 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 J3KTA2 159 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 SCDO00767 359 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 ZNF354AO60765 605 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-204ENST00000539721 UGT2B11O75310 529 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 OXSR1O95747 527 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-204ENST00000539721 GCKP35557 465 aa14.86□□□□□ -0.03
TRAF3-204ENST00000539721 RGS8P57771 180 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-204ENST00000539721 Q0VFX4 171 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms