RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 HIST1H1TP22492 207 aaPredicted RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 AHCYP23526 432 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ATP5A1P25705 553 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 RBMS1P29558 406 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 MPIP34949 423 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 THBS2P35442 1172 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 TALDO1P37837 337 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 RGS8P57771 180 aaPredicted RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 LRRC32Q14392 662 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ESCO2Q56NI9 601 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 C6orf132Q5T0Z8 1188 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SLC48A1Q6P1K1 146 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ABHD17CQ6PCB6 329 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SLC39A5Q6ZMH5 540 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 PLEKHM3Q6ZWE6 761 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 RFPL4BQ6ZWI9 263 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 OAFQ86UD1 273 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 C12orf40Q86WS4 652 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ELMOD2Q8IZ81 293 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 RAB42Q8N4Z0 105 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SIRT6Q8N6T7 355 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ACOT4Q8N9L9 421 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 NUP43Q8NFH3 380 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 OR2A1Q8NGT9 310 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 CXorf40AQ8TE69 158 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ELP4Q96EB1 424 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SLC41A3Q96GZ6 507 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SAMD8Q96LT4 415 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 MCHR1Q99705 422 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 TIMP4Q99727 224 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 MED28Q9H204 178 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 PIGUQ9H490 435 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ENAMQ9NRM1 1142 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ING4Q9UNL4 249 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ZFR2Q9UPR6 939 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 ENTPD4Q9Y227 616 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 NTNG1Q9Y2I2 539 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SIRT4Q9Y6E7 314 aaPredicted RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 CSNK1G3Q9Y6M4 447 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 BRCA2P51587 3418 aa9.02□□□□□ -0.96
CDH13-204ENST00000539548 C7orf66A4D0T2 115 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 GSAPA4D1B5 854 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 C4orf51C9J302 202 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 PRRT4C9JH25 899 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 RFXAPO00287 272 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 FABP7O15540 132 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CHP2O43745 196 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 AIFM1O95831 613 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 SLC35G4P0C7Q5 338 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 C8orf89P0DMQ9 161 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 TFPIP10646 304 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 F3P13726 295 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 F8A1P23610 371 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 BCL6P41182 706 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 PITPNBP48739 271 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CLCNKAP51800 687 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 NOGQ13253 232 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ELAVL3Q14576 367 aaKnown RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 FCN2Q15485 313 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CEBPEQ15744 281 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 FNDC3BQ53EP0 1204 aaKnown RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 FAM205BPQ63HN1 556 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 SDE2Q6IQ49 451 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CDC73Q6P1J9 531 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 MEPCEQ7L2J0 689 aaKnown RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 TPRA1Q86W33 373 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 LRRC17Q8N6Y2 441 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 OR8K5Q8NH50 307 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 GANCQ8TET4 914 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 NXPE3Q969Y0 559 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 GPR137Q96N19 417 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 TOX2Q96NM4 488 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 FCRL4Q96PJ5 515 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 FERD3LQ96RJ6 166 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ACTRT3Q9BYD9 372 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH13-204ENST00000539548 ABCG5Q9H222 651 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 UBQLN3Q9H347 655 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 GHITMQ9H3K2 345 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 FN3KQ9H479 309 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 OSGEPL1Q9H4B0 414 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 EMC7Q9NPA0 242 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 SLC23A1Q9UHI7 598 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 TEKT2Q9UIF3 430 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ACSL5Q9ULC5 683 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CACNG2Q9Y698 323 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 PDE4DIPQ5VU43 2346 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 LEUTXA8MZ59 168 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ERI3O43414 337 aaKnown RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 PIP5K1CO60331 668 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
CDH13-204ENST00000539548 SHC1P29353 583 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 ACSL1P33121 698 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 CDK3Q00526 305 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 IKZF1Q13422 519 aa9.02□□□□□ -0.97
CDH13-204ENST00000539548 TRAM1Q15629 374 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms