RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 NT5EP21589 574 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 SHC2P98077 582 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 TPBGQ13641 420 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 FZD2Q14332 565 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 COL19A1Q14993 1142 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 MAPK14Q16539 360 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 SPANXN2Q5MJ10 180 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 CCNJQ5T5M9 372 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 LIPKQ5VXJ0 399 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 STEAP3Q658P3 488 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 TAF8Q7Z7C8 310 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 OOSP2Q86WS3 158 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 RNF113BQ8IZP6 322 aaKnown RBP16.68■□□□□ 0.26
GNE-204ENST00000539208 OR5T3Q8NGG3 340 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 OR4Q3Q8NH05 313 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 PIK3R3Q92569 461 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 HOXB13Q92826 284 aaPredicted RBP16.68■□□□□ 0.26
GNE-204ENST00000539208 GDF15Q99988 308 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 PRSS27Q9BQR3 290 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 EVA1AQ9H8M9 152 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 CPNE5Q9HCH3 593 aa16.68■□□□□ 0.26
GNE-204ENST00000539208 CENPVL1A0A0U1RR11 272 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 TBX1O43435 398 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 HMGN1P05114 100 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 RORCP51449 518 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 RAB38P57729 211 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 COL9A2Q14055 689 aaPredicted RBP16.67■□□□□ 0.26
GNE-204ENST00000539208 PGGHGQ32M88 737 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 CLEC12AQ5QGZ9 265 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 COX18Q8N8Q8 333 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 GALNT6Q8NCL4 622 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 FLCNQ8NFG4 579 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 ITPKCQ96DU7 683 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 TRMT61AQ96FX7 289 aaKnown RBP16.67■□□□□ 0.26
GNE-204ENST00000539208 MSANTD3Q96H12 275 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 CDHR4A6H8M9 788 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 C2CD4DB7Z1M9 353 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 CELA2BP08218 269 aaPredicted RBP16.67■□□□□ 0.26
GNE-204ENST00000539208 NUDT1P36639 197 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 GPR4P46093 362 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 VSX2P58304 361 aaPredicted RBP16.67■□□□□ 0.26
GNE-204ENST00000539208 FLYWCH1Q4VC44 716 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 SLC30A6Q6NXT4 461 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 LAPTM4BQ86VI4 370 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 ANKRD9Q96BM1 317 aaPredicted RBP16.67■□□□□ 0.26
GNE-204ENST00000539208 SEMA6CQ9H3T2 930 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 CARD8Q9Y2G2 431 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 PCDHGB6Q9Y5F9 930 aa16.67■□□□□ 0.26
GNE-204ENST00000539208 WWP2O00308 870 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 PIP5K1CO60331 668 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 GUSBP08236 651 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 SLC35E2P0CK97 266 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 THEGLP0DJG4 465 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 CDH11P55287 796 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 COPZ1P61923 177 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 PLK5Q496M5 336 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 OR2T33Q8NG76 320 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 BRIX1Q8TDN6 353 aaKnown RBP16.66■□□□□ 0.26
GNE-204ENST00000539208 TOE1Q96GM8 510 aaKnown RBP16.66■□□□□ 0.26
GNE-204ENST00000539208 BARHL1Q9BZE3 327 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 KCNE5Q9UJ90 142 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 ZNF223Q9UK11 482 aaPredicted RBP16.66■□□□□ 0.26
GNE-204ENST00000539208 POMT2Q9UKY4 750 aa16.66■□□□□ 0.26
GNE-204ENST00000539208 EXOGQ9Y2C4 368 aaKnown RBP16.66■□□□□ 0.26
GNE-204ENST00000539208 CTDSP2O14595 271 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 IL1AP01583 271 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 TSPAN19P0C672 248 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 LIMS3P0CW19 117 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 LIMS4P0CW20 117 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CTSEP14091 401 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 MRPL2Q5T653 305 aaKnown RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 GALNT12Q8IXK2 581 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 ARHGEF39Q8N4T4 335 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 ZNF485Q8NCK3 441 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 GPR151Q8TDV0 419 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 NELL2Q99435 816 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 KCNS3Q9BQ31 491 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CCDC3Q9BQI4 270 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 ARHGAP9Q9BRR9 750 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 SMURF1Q9HCE7 757 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 TXNL4BQ9NX01 149 aaKnown RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 TRAPPC4Q9Y296 219 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 SPIN1Q9Y657 262 aaPredicted RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 XIRP2A4UGR9 3374 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CDC42EP2O14613 210 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 BRINP1O60477 761 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 NKX2-2O95096 273 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 LYPD3O95274 346 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 PTTG1O95997 202 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 CT62P0C5K7 136 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 HTR2AP28223 471 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 BLKP51451 505 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 POU6F2P78424 691 aaPredicted RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 HHEXQ03014 270 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 KRR1Q13601 381 aaKnown RBP16.65■□□□□ 0.26
GNE-204ENST00000539208 OR1Q1Q15612 314 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 ZNF542PQ5EBM4 170 aa16.65■□□□□ 0.26
GNE-204ENST00000539208 NXNL2Q5VZ03 156 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms