RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 UBLCP1Q8WVY7 318 aaPredicted RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 ARL8AQ96BM9 186 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 PTCD3Q96EY7 689 aaKnown RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 FAHD2AQ96GK7 314 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 ATP6V1G3Q96LB4 118 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 SLC6A7Q99884 636 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 EFCAB11Q9BUY7 163 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 EHD1Q9H4M9 534 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 CORO1CQ9ULV4 474 aaPredicted RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 SNX24Q9Y343 169 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 MYZAPP0CAP1 466 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 IL2RGP31785 369 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 PLTPP55058 493 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 SARNPP82979 210 aaKnown RBP8.07□□□□□ -1.12
USP28-205ENST00000537706 CALCOCO2Q13137 446 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 DESI1Q6ICB0 168 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 MFSD12Q6NUT3 480 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 DRICH1Q6PGQ1 229 aaPredicted RBP8.07□□□□□ -1.12
USP28-205ENST00000537706 C4orf22Q6V702 233 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 REC114Q7Z4M0 266 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 VN1R5Q7Z5H4 357 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 GALNT10Q86SR1 603 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 DENND6AQ8IWF6 608 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 C1orf54Q8WWF1 131 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 ATG4AQ8WYN0 398 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 RGMAQ96B86 450 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 SERPINB12Q96P63 405 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 LRRC37BQ96QE4 947 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 ITPAQ9BY32 194 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 TMBIM4Q9HC24 238 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 ZBTB26Q9HCK0 441 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 TIGARQ9NQ88 270 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 KLHL21Q9UJP4 597 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 PPIAL4AQ9Y536 164 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 M0R1B8 84 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 CXCL13O43927 109 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 KERAO60938 352 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 LILRA1O75019 489 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 LYZL6O75951 148 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 PNPP00491 289 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 MSMBP08118 114 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 IFNGR1P15260 489 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 DRD5P21918 477 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 SLC1A2P43004 574 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 KCNJ1P48048 391 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 ZNF83P51522 516 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 BASP1P80723 227 aaKnown RBP8.07□□□□□ -1.12
USP28-205ENST00000537706 CAV1Q03135 178 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 OR52E8Q6IFG1 317 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 B3GLCTQ6Y288 498 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 Q6ZT83 130 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 UBE3DQ7Z6J8 389 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 ZCCHC7Q8N3Z6 543 aaKnown RBP8.07□□□□□ -1.12
USP28-205ENST00000537706 FADS6Q8N9I5 356 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 SYT14Q8NB59 555 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 OR2M3Q8NG83 312 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 OR5M1Q8NGP8 315 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 OR2V1Q8NHB1 315 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP28-205ENST00000537706 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
USP28-205ENST00000537706 ZBTB8AQ96BR9 441 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 CMTM7Q96FZ5 175 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 FAM167BQ9BTA0 163 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 MS4A8Q9BY19 250 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 FRMD8P1Q9BZ68 369 aaPredicted RBP8.07□□□□□ -1.12
USP28-205ENST00000537706 GP6Q9HCN6 339 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 SLC52A3Q9NQ40 469 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 NPAP1Q9NZP6 1156 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 ASIC3Q9UHC3 531 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 FBXO5Q9UKT4 447 aa8.07□□□□□ -1.12
USP28-205ENST00000537706 TRAV20A0A0B4J274 112 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 MAGEB16A2A368 324 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 IL33O95760 270 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 CD22P20273 847 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 ME2P23368 584 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 PPICP45877 212 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 CDKL1Q00532 357 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 SNX1Q13596 522 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 DOC2BQ14184 412 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 MORF4L2Q15014 288 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 LGSNQ5TDP6 509 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 AGBL2Q5U5Z8 902 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 HBMQ6B0K9 141 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 CYP20A1Q6UW02 462 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 FRA10AC1Q70Z53 315 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 C1QL2Q7Z5L3 287 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 SPNS2Q8IVW8 549 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 NANPQ8TBE9 248 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 NEU4Q8WWR8 484 aaPredicted RBP8.06□□□□□ -1.12
USP28-205ENST00000537706 TMBIM1Q969X1 311 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 SLC35A4Q96G79 324 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 ADOQ96SZ5 270 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 BRINP2Q9C0B6 783 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 TSPYL1Q9H0U9 437 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 KLHL13Q9P2N7 655 aa8.06□□□□□ -1.12
USP28-205ENST00000537706 A0A1B0GUS0 222 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ERICH4A6NGS2 130 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 OR5H1A6NKK0 313 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 TO15178 435 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms