RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 LHFPL3Q86UP9 236 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SIAH3Q8IW03 269 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 HIST1H2ACQ93077 130 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 HHIPQ96QV1 700 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 NIPSNAP1Q9BPW8 284 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 KXD1Q9BQD3 176 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 POLR1EQ9GZS1 481 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 LRRN3E7EW58 273 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 FGF10O15520 208 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 RECKO95980 971 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 EGFP01133 1207 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SEMG1P04279 462 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CNR1P21554 472 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 TRHRP34981 398 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SRP9P49458 86 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 GZMMP51124 257 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 TAP2Q03519 686 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 HYAL1Q12794 435 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 POU4F2Q12837 409 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 HDDC3Q8N4P3 179 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SCAMP5Q8TAC9 235 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 C1QTNF3Q9BXJ4 246 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 LRRN3Q9H3W5 708 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CWH43Q9H720 699 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 TBC1D17Q9HA65 648 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CLEC4AQ9UMR7 237 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CHST10O43529 356 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 VEGFDO43915 354 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 NCR1O76036 304 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 PAX6P26367 422 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CASP6P55212 293 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 ERVPABLB-1P60509 514 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 ZP1P60852 638 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF33AQ06730 810 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 MANEAQ5SRI9 462 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 FAM111BQ6SJ93 734 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SSX6Q7RTT6 188 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 MAMDC2Q7Z304 686 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 GPR135Q8IZ08 494 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 AQP11Q8NBQ7 271 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 C11orf65Q8NCR3 313 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 OR8J1Q8NGP2 316 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 SNX33Q8WV41 574 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 LINC01599Q8WXQ3 324 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 TMPRSS4Q9NRS4 437 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CORO2BQ9UQ03 480 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 TRBV5-3A0A0A0MS03 114 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RPS14P62263 151 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 UBE2IP63279 158 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TFF2Q03403 129 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 VEZF1Q14119 521 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 ARHGEF7Q14155 803 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RBMS2Q15434 407 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 FAM69AQ5T7M9 428 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RAB12Q6IQ22 244 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 SERPINA13PQ6UXR4 307 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 REC114Q7Z4M0 266 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 ARL14EPQ8N8R7 260 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RELL2Q8NC24 303 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TSTD1Q8NFU3 115 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 ACOT11Q8WXI4 607 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 MEGF10Q96KG7 1140 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 PANX1Q96RD7 426 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 CYSLTR2Q9NS75 346 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 DHRS7Q9Y394 339 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 KANTRA0A1W2PQU2 76 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 A0A1W2PRB8 838 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 ZAR1LA6NP61 321 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 C5orf67F2Z3F1 127 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 WISP3O95389 354 aaPredicted RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 IFNA10P01566 189 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 NDUFB7P17568 137 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RFX3P48380 749 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 AP3S2P59780 193 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 CCINQ13939 588 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 FNDC3BQ53EP0 1204 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 CRTC1Q6UUV9 634 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TMIGD1Q6UXZ0 262 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TPRG1Q6ZUI0 275 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TMEM130Q8N3G9 435 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 FAM71CQ8NEG0 241 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 TRMT10AQ8TBZ6 339 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 KCTD12Q96CX2 325 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 CNTNAP3BQ96NU0 1288 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 SMCO4Q9NRQ5 59 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 SEMA3GQ9NS98 782 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 RAI2Q9Y5P3 530 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 MICAL3Q7RTP6 2002 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 A0A1B0GUH1 482 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 OR6C74A6NCV1 312 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 FPGTO14772 594 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 BRINP1O60477 761 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 GATBO75879 557 aaKnown RBP10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 CERS1P27544 350 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 PTPN6P29350 595 aa10.22□□□□□ -0.77
CLSTN3-207ENST00000537408 PDHA2P29803 388 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms