RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 KLHDC8AQ8IYD2 350 aa10.08□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF619Q8N2I2 560 aa10.08□□□□□ -0.8
CLIP1-209ENST00000537178 TBC1D20Q96BZ9 403 aa10.08□□□□□ -0.8
CLIP1-209ENST00000537178 TCRBV21S2A2A0A5A6 115 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 TFP02787 698 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CSF1P09603 554 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RAB4AP20338 218 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 MYF6P23409 242 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 WNT4P56705 351 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FXYD4P59646 89 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SIM1P81133 766 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 GK3PQ14409 553 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF674Q2M3X9 581 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HMGN2P46Q86SG4 172 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SERINC5Q86VE9 423 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SLC5A8Q8N695 610 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 OR51T1Q8NGJ9 327 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SLC41A3Q96GZ6 507 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 METTL2AQ96IZ6 378 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RDH14Q9HBH5 336 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 TMEM45AQ9NWC5 275 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ANKRD31Q8N7Z5 1873 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 A6NIZ1 184 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CD300LBA8K4G0 201 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 D6RAR5 112 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RTCAO00442 366 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 LCKP06239 509 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CDK1P06493 297 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 GAAP10253 952 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SLC2A5P22732 501 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HOXA9P31269 272 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HMGCLP35914 325 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CD79BP40259 229 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RAP1BP61224 184 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RAP1AP62834 184 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 MOGSQ13724 837 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SERTAD2Q14140 314 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HES5Q5TA89 166 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 VASH1Q7L8A9 365 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 S100A7AQ86SG5 101 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FNDC9Q8TBE3 224 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF681Q96N22 645 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FCRL3Q96P31 734 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 PPP1R14DQ9NXH3 145 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SIP14410 1827 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 A8MVJ9 347 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HCRTO43612 131 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 OR2T1O43869 369 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SERPINA7P05543 415 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 DCNP07585 359 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RHOP08100 348 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 NUDT7P0C024 238 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CERS1P27544 350 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ETV4P43268 484 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 STK19P49842 368 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 GK2Q14410 553 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FIGLAQ6QHK4 219 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CTU1Q7Z7A3 348 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 NICN1Q9BSH3 213 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 SYNPO2LQ9H987 977 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 NCDNQ9UBB6 729 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 UNCXA6NJT0 531 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF736B4DX44 427 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 MAN2B1O00754 1011 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CYB5BO43169 146 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 CRTAPO75718 401 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FDXRP22570 491 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 PTPN6P29350 595 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RBMS1P29558 406 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 STT3AP46977 705 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 RNF144AP50876 292 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 NKPD1Q17RQ9 610 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 AAK1Q2M2I8 961 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 FAM182AQ5T1J6 154 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 TAS1R3Q7RTX0 852 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 MRPL21Q7Z2W9 205 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HORMAD2Q8N7B1 307 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 OR14L1PQ8NHC6 308 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 TRMT2BQ96GJ1 504 aaKnown RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF419Q96HQ0 510 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-209ENST00000537178 MFFQ9GZY8 342 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 KCNK13Q9HB14 408 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 HEBP1Q9NRV9 189 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 STYXL1Q9Y6J8 313 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 UBR3Q6ZT12 1888 aa10.07□□□□□ -0.8
CLIP1-209ENST00000537178 MYOCOSA0A1B0GUC4 107 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 IVDP26440 423 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 VEGFCP49767 419 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PROX2Q3B8N5 592 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SLC2A13Q96QE2 648 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 RBM24Q9BX46 236 aaKnown RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 GPR174Q9BXC1 333 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PNMTP11086 282 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms