RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LGI1O95970 557 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 OR12D1P0DN82 309 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 AHRP35869 848 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 TSFMP43897 325 aaKnown RBP16.81■□□□□ 0.28
RAB40C-203ENST00000535977 ERVK-21P61565 698 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF628Q5EBL2 1059 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 SLC25A30Q5SVS4 291 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 PGBD2Q6P3X8 592 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 LRFN4Q6PJG9 635 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 TFAP2EQ6VUC0 442 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF655Q8N720 491 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-203ENST00000535977 XAGE5Q8WWM1 108 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 RERGLQ9H628 205 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 NCKAP1Q9Y2A7 1128 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 MRPS7Q9Y2R9 242 aaKnown RBP16.81■□□□□ 0.28
RAB40C-203ENST00000535977 STON1Q9Y6Q2 735 aa16.81■□□□□ 0.28
RAB40C-203ENST00000535977 ISM1B1AKI9 464 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 MAN2B1O00754 1011 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 GJA4P35212 333 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF81P51508 661 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 ENPP2Q13822 863 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 KRT33BQ14525 404 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 SEC23BQ15437 767 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 SNAPC1Q16533 368 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 C6orf132Q5T0Z8 1188 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 KIAA1211LQ6NV74 962 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 HSDL2Q6YN16 418 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 OR11H7Q8NGC8 314 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 FNDC11Q9BVV2 318 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 SARGQ9BW04 601 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 SAV1Q9H4B6 383 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 PPP1R3EQ9H7J1 279 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 ANKRA2Q9H9E1 313 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 MRPS30Q9NP92 439 aaKnown RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 ZCCHC3Q9NUD5 404 aaKnown RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 PCDHGB7Q9Y5F8 929 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 MYO7AQ13402 2215 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 A0A1W2PPL8 197 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 CASC3O15234 703 aaKnown RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 PTP4A3O75365 173 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 NUP62P37198 522 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 LGALSLQ3ZCW2 172 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 RTL4Q6ZR62 310 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 DGLUCYQ7Z3D6 616 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 ADGRD2Q7Z7M1 963 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 CLDN22Q8N7P3 220 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 CDCP1Q9H5V8 836 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 POLMQ9NP87 494 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 MBNL1Q9NR56 388 aaKnown RBP16.8■□□□□ 0.28
RAB40C-203ENST00000535977 C5AR2Q9P296 337 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 TRPC4Q9UBN4 977 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 COPS3Q9UNS2 423 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 TRPM6Q9BX84 2022 aa16.8■□□□□ 0.28
RAB40C-203ENST00000535977 NUMA1Q14980 2115 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 A0A0G2JPF8 293 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 hCG_1807616A0A1W2PRN6 198 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 HNRNPCL2B2RXH8 293 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 HNRNPCL3B7ZW38 293 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 H3BN98 237 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 ENTPD6O75354 484 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 IL1AP01583 271 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 APODP05090 189 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SERPIND1P05546 499 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 HNRNPCL4P0DMR1 293 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 ACP5P13686 325 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 NCBP2P52298 156 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB40C-203ENST00000535977 IRF4Q15306 451 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SPHARQ15513 63 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 MLF2Q15773 248 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SYPL1Q16563 259 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 C22orf42Q6IC83 251 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 CNIH2Q6PI25 160 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 HDDC3Q8N4P3 179 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 OR56A1Q8NGH5 318 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SUN3Q8TAQ9 357 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF416Q9BWM5 594 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 OSGEPL1Q9H4B0 414 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 FANCFQ9NPI8 374 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 TXNL4BQ9NX01 149 aaKnown RBP16.79■□□□□ 0.28
RAB40C-203ENST00000535977 NDUFB11Q9NX14 153 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 COMMD3Q9UBI1 195 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 A4GNTQ9UNA3 340 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 NME6O75414 186 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-203ENST00000535977 GSTM3P21266 225 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 RPS21P63220 83 aaKnown RBP16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SGCGQ13326 291 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 GPM6BQ13491 265 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 LRRC32Q14392 662 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SF3A2Q15428 464 aaKnown RBP16.79■□□□□ 0.28
RAB40C-203ENST00000535977 LIPKQ5VXJ0 399 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 FAM26EQ8N5C1 309 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 C7orf57Q8NEG2 295 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 OR9Q1Q8NGQ5 310 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 UCN3Q969E3 161 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 CREB3L1Q96BA8 519 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 TMEM43Q9BTV4 400 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 MND1Q9BWT6 205 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 FOLH1BQ9HBA9 442 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 C11orf16Q9NQ32 467 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 SLCO1C1Q9NYB5 712 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms