RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 RTTNQ86VV8 2226 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 IGLV7-46A0A075B6I9 117 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 A0A087WUV0 522 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 TRBV5-5A0A0J9YX44 114 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SPTY2D1-AS1A0A0U1RR47 76 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 C15orf61A6NNL5 157 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 A8MVM7 634 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 KRTAP29-1A8MX34 341 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 LMO7DNF2Z398 122 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 MCF2LO15068 1137 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SURF4O15260 269 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 DPM1O60762 260 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 PFKFB2O60825 505 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SDC3O75056 442 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 GAS8O95995 478 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 NGFP01138 241 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 ATP1B1P05026 303 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SERPING1P05155 500 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 FAM200BP0CF97 657 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 FERP16591 822 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 ITIH1P19827 911 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 CTNNA2P26232 953 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 GIFP27352 417 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SLC1A3P43003 542 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 NR0B1P51843 470 aaKnown RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF131P52739 623 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 NDST2P52849 883 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SLC12A3P55017 1021 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 MAP3K7CLP57077 242 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 RPS21P63220 83 aaKnown RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 ABRQ12979 859 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 TGIF1Q15583 401 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 TAZQ16635 292 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 UGP2Q16851 508 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 CEP85LQ5SZL2 805 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 C9orf64Q5T6V5 341 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 DDI2Q5TDH0 399 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SLC25A47Q6Q0C1 308 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SUSD1Q6UWL2 747 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SPNS3Q6ZMD2 512 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 Q6ZSR6 202 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 FAM47EQ6ZV65 393 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 RFPL4BQ6ZWI9 263 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 RAPH1Q70E73 1250 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 PARGQ86W56 976 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 CACUL1Q86Y37 369 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 CROCCP3Q8IVE0 287 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 MSANTD4Q8NCY6 345 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 OR2T11Q8NH01 316 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 OR4C3Q8NH37 302 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 OCC1Q8TAD7 63 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 LMX1AQ8TE12 382 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 GATAD1Q8WUU5 269 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 TAF4BQ92750 862 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 CORO2AQ92828 525 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 MR1Q95460 341 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 OMA1Q96E52 524 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 C10orf90Q96M02 699 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 LINC00479Q96M42 142 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 INTS14Q96SY0 518 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 KCNK16Q96T55 309 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 OPRPNQ99935 248 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 DDA1Q9BW61 102 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 DGCR6LQ9BY27 220 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SLC17A9Q9BYT1 436 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 LRRN3Q9H3W5 708 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SYNDIG1Q9H7V2 258 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 SP140LQ9H930 580 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 AKIRIN1Q9H9L7 192 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 GPN2Q9H9Y4 310 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 ABCC13Q9NSE7 274 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 MAN2C1Q9NTJ4 1040 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 TEX10Q9NXF1 929 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 HACD3Q9P035 362 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 KLHL8Q9P2G9 620 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 CGNQ9P2M7 1197 aaKnown RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 PISDQ9UG56 409 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 APPL1Q9UKG1 709 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 EXOGQ9Y2C4 368 aaKnown RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 KCNK7Q9Y2U2 307 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 NYNRINQ9P2P1 1898 aaKnown RBP2.85□□□□□ -1.95
SNHG1-202ENST00000535689 F8P00451 2351 aa2.85□□□□□ -1.95
SNHG1-202ENST00000535689 DOCK7Q96N67 2140 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 MAP1AP78559 2803 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 LOC105371242A0A075B767 164 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 A0A1B0GUH1 482 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 hCG_38984A0A1B0GV85 526 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 A0A1W2PPK0 400 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 MSGN1A6NI15 193 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 ANKRD63C9JTQ0 380 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CLDN5O00501 218 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TRAFD1O14545 582 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 CCSO14618 274 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 TFECO14948 347 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-202ENST00000535689 SLC22A2O15244 555 aa2.84□□□□□ -1.95
SNHG1-202ENST00000535689 SLC31A1O15431 190 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms