RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SCP2D1Q9UJQ7 156 aa6.18□□□□□ -1.42
USP28-202ENST00000535607 NEU3Q9UQ49 428 aa6.18□□□□□ -1.42
USP28-202ENST00000535607 EXOSC1Q9Y3B2 195 aaKnown RBP6.18□□□□□ -1.42
USP28-202ENST00000535607 NEUROG3Q9Y4Z2 214 aa6.18□□□□□ -1.42
USP28-202ENST00000535607 INSL6Q9Y581 213 aa6.18□□□□□ -1.42
USP28-202ENST00000535607 HS3ST4Q9Y661 456 aa6.18□□□□□ -1.42
USP28-202ENST00000535607 ARL5AQ9Y689 179 aa6.18□□□□□ -1.42
USP28-202ENST00000535607 COL4A4P53420 1690 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 LAMA2P24043 3122 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 SCN8AQ9UQD0 1980 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ARPC4-TTLL3A0A0A6YYG9 625 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 I6L893 689 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 M0R233 179 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 CCL22O00626 93 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 CASC3O15234 703 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 PLA2G10O15496 165 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 HCRTO43612 131 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 UGDHO60701 494 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 TPST2O60704 377 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 PRAF2O60831 178 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 NIPSNAP2O75323 286 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 CPSF4O95639 269 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 MOCS2O96007 188 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 PAHP00439 452 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 HLA-DPB1P04440 258 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 IFNW1P05000 195 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 HOXB9P17482 250 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 CAPZA2P47755 286 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 EVX1P49640 407 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 STK19P49842 368 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 TPMTP51580 245 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 HMGA2P52926 109 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 WNT4P56705 351 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 MAXP61244 160 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 B2MP61769 119 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SNRPD2P62316 118 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 KCNJ10P78508 379 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ABATP80404 500 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 FLI1Q01543 452 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 RPA4Q13156 261 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 FZD5Q13467 585 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 EIF4EBP2Q13542 120 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 RAB32Q13637 225 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ICAM4Q14773 271 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 PTGES3Q15185 160 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 SSX1Q16384 188 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SNAPC1Q16533 368 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SPDYE7PQ495Y7 208 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 C3orf38Q5JPI3 329 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SLC25A30Q5SVS4 291 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 HECTD3Q5T447 861 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 GCNT6Q5T4J0 391 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 CPTPQ5TA50 214 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 PXDC1Q5TGL8 231 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 FRMPD2BQ6IN97 320 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 CNIH2Q6PI25 160 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 RTL4Q6ZR62 310 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 TTLL10Q6ZVT0 673 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 KRT74Q7RTS7 529 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 VTCN1Q7Z7D3 282 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 MON1AQ86VX9 555 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ZNF280BQ86YH2 543 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SPATA2LQ8IUW3 424 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 PHC2Q8IXK0 858 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ADGRF3Q8IZF5 1079 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 KRTCAP2Q8N6L1 136 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 TTC9BQ8N6N2 239 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ZNF557Q8N988 423 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 ATP6V1C2Q8NEY4 427 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 OR4C15Q8NGM1 316 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 GIMAP1Q8WWP7 306 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 HGDQ93099 445 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 UCN3Q969E3 161 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 PSMG2Q969U7 264 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SGTBQ96EQ0 304 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 APIPQ96GX9 242 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ZNF558Q96NG5 402 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SORCS2Q96PQ0 1159 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 OR5M11Q96RB7 305 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 BARD1Q99728 777 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 INPP5KQ9BT40 448 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 APOL5Q9BWW9 433 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 NLNQ9BYT8 704 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 BARHL1Q9BZE3 327 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 ZNF436Q9C0F3 470 aaPredicted RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 B3GNT4Q9C0J1 378 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 MAGEH1Q9H213 219 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 CXCL16Q9H2A7 254 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 RNF167Q9H6Y7 350 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 TPT1P8Q9HAU6 139 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 SLC25A19Q9HC21 320 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 AMBNQ9NP70 447 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 FZD3Q9NPG1 666 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 PCDHB16Q9NRJ7 776 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 MARCH5Q9NX47 278 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 NDUFAF4Q9P032 175 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 NLKQ9UBE8 527 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 FZD4Q9ULV1 537 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 NDRG2Q9UN36 371 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 DIMT1Q9UNQ2 313 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms