RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 EMC8O43402 210 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 VAPBO95292 243 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 FADS2O95864 444 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 GPIP06744 558 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 MMP3P08254 477 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 ELFN1P0C7U0 828 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 CHRNB1P11230 501 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 H2AFXP16104 143 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 PRPS1L1P21108 318 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 UGT2B10P36537 528 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 HMGCS2P54868 508 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 NUP107P57740 925 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 IL9RQ01113 521 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 OCA2Q04671 838 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 MAD2L1Q13257 205 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 IKZF1Q13422 519 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 ARMCX4Q5H9R4 360 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 FAM102AQ5T9C2 384 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 ULK3Q6PHR2 472 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 KIRREL2Q6UWL6 708 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 PRSS57Q6UWY2 283 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 GOLGA7Q7Z5G4 137 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 CLVS1Q8IUQ0 354 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 MFSD6LQ8IWD5 586 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 BOD1L2Q8IYS8 172 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 ZNF34Q8IZ26 560 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 OR5D18Q8NGL1 313 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 ZNF503Q96F45 646 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 SLC38A2Q96QD8 506 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 P2RY13Q9BPV8 354 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 MIOXQ9UGB7 285 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 DAPK2Q9UIK4 370 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 ADAMTS5Q9UNA0 930 aa4.79□□□□□ -1.64
ECHDC1-222ENST00000531967 TCHHQ07283 1943 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 LRRC30A6NM36 301 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 ERVV-2B6SEH9 535 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 GATCO43716 136 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 GRAP2O75791 330 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 BMP10O95393 424 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 EGFP01133 1207 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 RAF1P04049 648 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 FABP1P07148 127 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 CT45A8P0DMV1 189 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 CT45A9P0DMV2 189 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 UGT1A4P22310 534 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 TEAD1P28347 426 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 CHRNA5P30532 468 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 UGT1A3P35503 534 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 AQP2P41181 271 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 NKX2-1P43699 371 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 NPY2RP49146 381 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 CFHR3Q02985 330 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 TSPAN31Q12999 210 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 PLA2G7Q13093 441 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 SF3B4Q15427 424 aaKnown RBP eCLIP4.78□□□□□ -1.641e-9■■■■■ 43.2
ECHDC1-222ENST00000531967 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 CT45A2Q5DJT8 189 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 BSPRYQ5W0U4 402 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 FAM122CQ6P4D5 195 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 C19orf35Q6ZS72 473 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 SLC13A5Q86YT5 568 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 ZBED8Q8IZ13 594 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 IQCKQ8N0W5 287 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 CRIPAKQ8N1N5 446 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 HORMAD2Q8N7B1 307 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 OR52N2Q8NGI0 321 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 OR6M1Q8NGM8 313 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 WDR36Q8NI36 951 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 NANPQ8TBE9 248 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 ADAMTS17Q8TE56 1095 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 TMEM37Q8WXS4 190 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 SMPDL3BQ92485 455 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 GRAMD2BQ96HH9 432 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 BOD1Q96IK1 185 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 TEPSINQ96N21 525 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 RANBP9Q96S59 729 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 C11orf84Q9BUA3 381 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 COL25A1Q9BXS0 654 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 LPAR2Q9HBW0 351 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 VCX3AQ9NNX9 186 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 MYEF2Q9P2K5 600 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 AP3M1Q9Y2T2 418 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 TMED3Q9Y3Q3 217 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 WNT6Q9Y6F9 365 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 MN1Q10571 1320 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 ARPC1BO15143 372 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 RNMTO43148 476 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 B4GALT5O43286 388 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 SNX3O60493 162 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 ARHGEF15O94989 841 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 ETHE1O95571 254 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 M6PRP20645 277 aa4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 TMPOP42166 694 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-222ENST00000531967 DUSP3P51452 185 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms