RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 ANGPTL2Q9UKU9 493 aa3.31□□□□□ -1.88
SOX6-212ENST00000529469 VANGL2Q9ULK5 521 aa3.31□□□□□ -1.88
SOX6-212ENST00000529469 TMCO1Q9UM00 188 aa3.31□□□□□ -1.88
SOX6-212ENST00000529469 STK38LQ9Y2H1 464 aa3.31□□□□□ -1.88
SOX6-212ENST00000529469 USP16Q9Y5T5 823 aa3.31□□□□□ -1.88
SOX6-212ENST00000529469 NCOA3Q9Y6Q9 1424 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 RPAP1Q9BWH6 1393 aaPredicted RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 TNIKQ9UKE5 1360 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 IGLV3-10A0A075B6K4 115 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 TRAV9-2A0A087WT02 112 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 OR6C74A6NCV1 312 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 NCF1BA6NI72 391 aaPredicted RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 OR5K4A6NMS3 321 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 NCF1CA8MVU1 366 aaPredicted RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 MEI4A8MW99 385 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 L7N2F9 121 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 RAD51BO15315 384 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 LRRTM2O43300 516 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 SPOPO43791 374 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 HSF2BPO75031 334 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 KBTBD11O94819 623 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 OPN1MWP04001 364 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 GLAP06280 429 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 RETP07949 1114 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 FCGR3AP08637 254 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 ALOX5P09917 674 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 OPN1MW2P0DN77 364 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 OPN1MW3P0DN78 364 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CALM1P0DP23 149 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CALM2P0DP24 149 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CALM3P0DP25 149 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CTRB1P17538 263 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 HTR2BP41595 481 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CNN1P51911 297 aaKnown RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 HNRNPFP52597 415 aaKnown RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 GEMP55040 296 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 MTTPP55157 894 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 GMFBP60983 142 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 PLD1Q13393 1074 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 TSTA3Q13630 321 aaPredicted RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 DMC1Q14565 340 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 NCF4Q15080 339 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 KRT31Q15323 416 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CTRB2Q6GPI1 263 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 ERICH5Q6P6B1 374 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 C6orf89Q6UWU4 347 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 DLEU7Q6UYE1 221 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 B3GLCTQ6Y288 498 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 RBM43Q6ZSC3 357 aaKnown RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 COMTD1Q86VU5 262 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CDH26Q8IXH8 852 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 C12orf56Q8IXR9 622 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 FBXW8Q8N3Y1 598 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 OR8K3Q8NH51 312 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 TMIGD2Q96BF3 282 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 CCDC42Q96M95 316 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 NSMCE2Q96MF7 247 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 KCNK16Q96T55 309 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 C19orf43Q9BQ61 176 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 APOL2Q9BQE5 337 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 FUNDC2Q9BWH2 189 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 SLC26A1Q9H2B4 701 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 TMEM245Q9H330 911 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 DPEP3Q9H4B8 488 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 HAUS4Q9H6D7 363 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 GORASP2Q9H8Y8 452 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 C12orf10Q9HB07 376 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 IL1RL2Q9HB29 575 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 MRM3Q9HC36 420 aaKnown RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 NEK6Q9HC98 313 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 SOHLH2Q9NX45 425 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 RHBDL2Q9NX52 303 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 TAS2R16Q9NYV7 291 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 COX16Q9P0S2 106 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 SENP1Q9P0U3 644 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 DIMT1Q9UNQ2 313 aaKnown RBP3.3□□□□□ -1.88
SOX6-212ENST00000529469 AURKCQ9UQB9 309 aa3.3□□□□□ -1.88
SOX6-212ENST00000529469 PTPRGP23470 1445 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 SBNO1A3KN83 1393 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 NPC1L1Q9UHC9 1359 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 MROH5Q6ZUA9 1318 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 C1orf232A0A0U1RR37 186 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 ARHGAP42A6NI28 874 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 RNF212BA8MTL3 300 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 ZNF487B1APH4 448 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 SLC28A1O00337 649 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 RASGRF2O14827 1237 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 BIRC5O15392 142 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 SMIM24O75264 130 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 LCA5LO95447 670 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 PGK2P07205 417 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 KRT7P08729 469 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 MMP10P09238 476 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 CHRNA3P32297 505 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 RFC4P35249 363 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 GDI2P50395 445 aaKnown RBP3.29□□□□□ -1.88
SOX6-212ENST00000529469 HERV-K104P63124 156 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 RUNX3Q13761 415 aa3.29□□□□□ -1.88
SOX6-212ENST00000529469 RFTN1Q14699 578 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms