RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 SATB2Q9UPW6 733 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 RPL36Q9Y3U8 105 aaKnown RBP10.97□□□□□ -0.65
USF1-208ENST00000528768 SLC22A7Q9Y694 548 aa10.97□□□□□ -0.65
USF1-208ENST00000528768 A0A087WV62 115 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 C4orf51C9J302 202 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 H0YGG7 62 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 FFAR1O14842 300 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 PRKRAO75569 313 aaKnown RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 EIF2S1P05198 315 aaKnown RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 CHRM4P08173 479 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 ALOX5P09917 674 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 CPMP14384 443 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 CD36P16671 472 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 ZNF182P17025 639 aaPredicted RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 GSSP48637 474 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 ARF3P61204 181 aaPredicted RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 ZNF846Q147U1 533 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 SMN1Q16637 294 aaKnown RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 DEFB134Q4QY38 66 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 C3orf38Q5JPI3 329 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 PGBD2Q6P3X8 592 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 ARHGAP22Q7Z5H3 698 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 PARGQ86W56 976 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 CYP4Z2PQ8N1L4 340 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 SLC25A45Q8N413 288 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 CSNK1A1LQ8N752 337 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 OR8J1Q8NGP2 316 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 WDR36Q8NI36 951 aaKnown RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 ADAMTS18Q8TE60 1221 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 ARHGDIGQ99819 225 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 WDR12Q9GZL7 423 aaKnown RBP10.96□□□□□ -0.65
USF1-208ENST00000528768 SEMA6CQ9H3T2 930 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 HMG20AQ9NP66 347 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 EQTNQ9NQ60 294 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 KCMF1Q9P0J7 381 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 A4GNTQ9UNA3 340 aa10.96□□□□□ -0.65
USF1-208ENST00000528768 DSPPQ9NZW4 1301 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 OR5K3A6NET4 321 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 M0R3H8 397 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 COQ9O75208 318 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 GPR75O95800 540 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 RECKO95980 971 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 GABRB1P18505 474 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 SMSP52788 366 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 RGS8P57771 180 aaPredicted RBP10.95□□□□□ -0.66
USF1-208ENST00000528768 HHEXQ03014 270 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 EIF2B5Q13144 721 aaKnown RBP10.95□□□□□ -0.66
USF1-208ENST00000528768 CLN3Q13286 438 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 RUNX2Q13950 521 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 NR1D2Q14995 579 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 ELOCQ15369 112 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 TIGD6Q17RP2 521 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 TMEM44Q2T9K0 475 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 ARHGAP11BQ3KRB8 267 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 LINC00303Q3SY05 128 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 C4orf17Q53FE4 359 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 C12orf73Q69YU5 71 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 HEPHL1Q6MZM0 1159 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 MFSD12Q6NUT3 480 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 PODNL1Q6PEZ8 512 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 SLC16A12Q6ZSM3 486 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 GKN2Q86XP6 184 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 OR2L13Q8N349 312 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 CDRT4Q8N9R6 151 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 KBTBD8Q8NFY9 601 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 OR9Q1Q8NGQ5 310 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 OR52P1PQ8NH57 321 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 PIGXQ8TBF5 258 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 ZNF675Q8TD23 568 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 SLC37A2Q8TED4 501 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 ZDHHC1Q8WTX9 485 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 KLHL6Q8WZ60 621 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 KAT2AQ92830 837 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 C16orf58Q96GQ5 468 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 C10orf90Q96M02 699 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 SLC38A2Q96QD8 506 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 SIGLEC11Q96RL6 698 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 CDCA4Q9BXL8 241 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 PIGUQ9H490 435 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 POLE3Q9NRF9 147 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 NDOR1Q9UHB4 597 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
USF1-208ENST00000528768 MRPS33Q9Y291 106 aaKnown RBP10.95□□□□□ -0.66
USF1-208ENST00000528768 TEP1Q99973 2627 aaKnown RBP10.95□□□□□ -0.66
USF1-208ENST00000528768 HEATR5BQ9P2D3 2071 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CREBBPQ92793 2442 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 PRAMEF27A3QJZ7 478 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CTSVO60911 334 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 SDC3O75056 442 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CYP7B1O75881 506 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 OR5F1O95221 314 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 RPLP0P05388 317 aaKnown RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 DBIP07108 87 aaKnown RBP10.94□□□□□ -0.66
USF1-208ENST00000528768 THBS1P07996 1170 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 NT5EP21589 574 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 CDH3P22223 829 aa10.94□□□□□ -0.66
USF1-208ENST00000528768 ACVR2AP27037 513 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms