RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 RSPO3Q9BXY4 272 aaPredicted RBP11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 QRSL1Q9H0R6 528 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ANKRD10Q9NXR5 420 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CALML5Q9NZT1 146 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MRTO4Q9UKD2 239 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ANGPT4Q9Y264 503 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CPAMD8Q8IZJ3 1885 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 A0A0G2JPF8 293 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HNRNPCL2B2RXH8 293 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HNRNPCL3B7ZW38 293 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NPIPB9F8W1W9 429 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CXCR6O00574 342 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GSTA4O15217 222 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 KIAA0513O60268 411 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ICOSLGO75144 302 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GUSBP08236 651 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HNRNPCL4P0DMR1 293 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ATP6V1C1P21283 382 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CD96P40200 585 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HLCSP50747 726 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PSMD4P55036 377 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HPCAP84074 193 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MFAP5Q13361 173 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MAPK14Q16539 360 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NTRK2Q16620 822 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 LINC00303Q3SY05 128 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 FLYWCH1Q4VC44 716 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 C1orf146Q5VVC0 180 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF227Q86WZ6 799 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF619Q8N2I2 560 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 OR10G3Q8NGC4 313 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 BBS10Q8TAM1 723 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 FIG4Q92562 907 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HGDQ93099 445 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NODALQ96S42 347 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MTHFD2LQ9H903 347 aaPredicted RBP11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 POLE3Q9NRF9 147 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PLA2G3Q9NZ20 509 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SUCOQ9UBS9 1254 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 C15orf41Q9Y2V0 281 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF451Q9Y4E5 1061 aa11.17□□□□□ -0.62
TRAF3IP2-211ENST00000528599 EXPH5Q8NEV8 1989 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 M0QX08 132 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ACOT8O14734 319 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ARPC2O15144 300 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ABCB7O75027 752 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 UTS2O95399 124 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 WDPCPO95876 746 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 KDELR2P33947 212 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TMED10P49755 219 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 BNIP2Q12982 314 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TUBA3CQ13748 450 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TRIM25Q14258 630 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GRAMD1BQ3KR37 738 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CMPK2Q5EBM0 449 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 INTS11Q5TA45 600 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GLYATQ6IB77 296 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TUBA3EQ6PEY2 450 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 APOOLQ6UXV4 268 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 NUP54Q7Z3B4 507 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SLC30A8Q8IWU4 369 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 HPF1Q9NWY4 346 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 POMPQ9Y244 141 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SNX13Q9Y5W8 968 aa11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 GPC6Q9Y625 555 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-211ENST00000528599 AGAP5A6NIR3 686 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 FADS1O60427 444 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 UGT2B17O75795 530 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ETS2P15036 469 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 LCN1P31025 176 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 DCTP40126 519 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 PTDSS1P48651 473 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CYB561P49447 251 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RNF144AP50876 292 aaPredicted RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ATP12AP54707 1039 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 OC90Q02509 493 aaPredicted RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 EFR3AQ14156 821 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RCN1Q15293 331 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ZNF141Q15928 474 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 IGFL2Q6UWQ7 119 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MDGA2Q7Z553 956 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CYP4Z2PQ8N1L4 340 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RNF138Q8WVD3 245 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TAMM41Q96BW9 452 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ASB9Q96DX5 294 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SMAD5Q99717 465 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 UTP23Q9BRU9 249 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TACO1Q9BSH4 297 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TRIM45Q9H8W5 580 aaPredicted RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 SH2D2AQ9NP31 389 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 UBQLN4Q9NRR5 601 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 RYDENQ9NUL5 291 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 ABI3Q9P2A4 366 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 MAGEL2Q9UJ55 1249 aa11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 CHCHD2Q9Y6H1 151 aaPredicted RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TLN1Q9Y490 2541 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-211ENST00000528599 TMEM229AB2RXF0 380 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms