RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TNFRSF12AQ9NP84 129 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 STOML1Q9UBI4 398 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 ST6GALNAC2Q9UJ37 374 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
CAPN1-212ENST00000527887 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 TMEM114B3SHH9 223 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 SCO2O43819 266 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 NME6O75414 186 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 TNFRSF21O75509 655 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 SOX30O94993 753 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 NGFRP08138 427 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 DNASE1P24855 282 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 GABRA3P34903 492 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 SERPINB5P36952 375 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 MAP3K8P41279 467 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 FRKP42685 505 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 MANFP55145 182 aaKnown RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 B3GALT5-AS1P59052 145 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 PRR5P85299 388 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 FGFBP1Q14512 234 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 PCLAFQ15004 111 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 MLC1Q15049 377 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 KANK2Q63ZY3 851 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 CAMKMTQ7Z624 323 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 CDC20BQ86Y33 519 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 NATD1Q8N6N6 113 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 CHDHQ8NE62 594 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 INTS12Q96CB8 462 aaKnown RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 TBL1XR1Q9BZK7 514 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 NSRP1Q9H0G5 558 aaKnown RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 RPH3AQ9Y2J0 694 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-212ENST00000527887 DNAJC15Q9Y5T4 150 aa12.84□□□□□ -0.35
CAPN1-212ENST00000527887 ITPR3Q14573 2671 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 MTORP42345 2549 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 A8MXE2 369 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 MSTNO14793 375 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 LSM1O15116 133 aaKnown RBP12.83□□□□□ -0.36
CAPN1-212ENST00000527887 NKX2-2O95096 273 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 SNUPNO95149 360 aaKnown RBP12.83□□□□□ -0.36
CAPN1-212ENST00000527887 HSPA4LO95757 839 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 BPGMP07738 259 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 SDC1P18827 310 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 HK1P19367 917 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 MAPK1P28482 360 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 CPA2P48052 419 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 SERPINB4P48594 390 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 FOXF2Q12947 444 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 HSPB3Q12988 150 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 SNTB1Q13884 538 aaKnown RBP12.83□□□□□ -0.36
CAPN1-212ENST00000527887 PDE7AQ13946 482 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 RFTN2Q52LD8 501 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF551Q7Z340 670 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-212ENST00000527887 P4HA3Q7Z4N8 544 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 NUP43Q8NFH3 380 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 DUSP19Q8WTR2 217 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 MBD6Q96DN6 1003 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 C1GALT1C1Q96EU7 318 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 PPP3R2Q96LZ3 170 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 C12orf65Q9H3J6 166 aaKnown RBP12.83□□□□□ -0.36
CAPN1-212ENST00000527887 MED11Q9P086 117 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 SH3BP4Q9P0V3 963 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 NDRG3Q9UGV2 375 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 PACSIN3Q9UKS6 424 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF175Q9Y473 711 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 TRAF6Q9Y4K3 522 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 AP4B1Q9Y6B7 739 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 ARHGAP21Q5T5U3 1957 aa12.83□□□□□ -0.36
CAPN1-212ENST00000527887 SETD2Q9BYW2 2564 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-212ENST00000527887 EXPH5Q8NEV8 1989 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 A0A087WZY1 265 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 A0A1W2PNV4 684 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 SLC22A20A6NK97 555 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 B4DXG7 233 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 ALG1L2C9J202 215 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 EMC8O43402 210 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 TNFSF13O75888 250 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 UTS2O95399 124 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 ANGPTL1O95841 491 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 LINC00032P0C843 101 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 RPS3AP61247 264 aaKnown RBP12.82□□□□□ -0.36
CAPN1-212ENST00000527887 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPN1-212ENST00000527887 RAET1LQ5VY80 246 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 FBXW10Q5XX13 1052 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 OR2T11Q8NH01 316 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 FAM110BQ8TC76 370 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 MGARPQ8TDB4 240 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 GPR151Q8TDV0 419 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF75CPQ92670 426 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-212ENST00000527887 GFM2Q969S9 779 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms