RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 PLXND1Q9Y4D7 1925 aa4.12□□□□□ -1.75
COPB1-204ENST00000526191 MYH10P35580 1976 aa4.12□□□□□ -1.75
COPB1-204ENST00000526191 MYH11P35749 1972 aa4.12□□□□□ -1.75
COPB1-204ENST00000526191 KNL1Q8NG31 2342 aa4.12□□□□□ -1.75
COPB1-204ENST00000526191 PTPN13Q12923 2485 aa4.12□□□□□ -1.75
COPB1-204ENST00000526191 SCN1AP35498 2009 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 A0A1B0GUA9 196 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 SDR42E2A6NKP2 422 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 SGK1O00141 431 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 TRDMT1O14717 391 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 NME6O75414 186 aaPredicted RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 AKAP3O75969 853 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 TRIM16O95361 564 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 KLF8O95600 359 aaPredicted RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 RPLP0P05388 317 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 CTNNA2P26232 953 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 CHMLP26374 656 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 AXLP30530 894 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 CTNNA1P35221 906 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 NT5C2P49902 561 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 BTG1P62324 171 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 IL9RQ01113 521 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 KDSRQ06136 332 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 TFDP1Q14186 410 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 LRRC37A5PQ49AS3 106 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 SLC8B1Q6J4K2 584 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 PIWIL3Q7Z3Z3 882 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 TUSC5Q8IXB3 177 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 SYCP3Q8IZU3 236 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 RTL3Q8N8U3 475 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 TCP11Q8WWU5 503 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 CCDC43Q96MW1 224 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 CYP2S1Q96SQ9 504 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 PSMB7Q99436 277 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 JPH2Q9BR39 696 aaPredicted RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 LINC00597Q9H2U6 94 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 RBM28Q9NW13 759 aaKnown RBP4.11□□□□□ -1.75
COPB1-204ENST00000526191 TUBGCP4Q9UGJ1 667 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 CABIN1Q9Y6J0 2220 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 COL6A6A6NMZ7 2263 aa4.11□□□□□ -1.75
COPB1-204ENST00000526191 NUMA1Q14980 2115 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 SPTA1P02549 2419 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 SMIM28A0A1B0GU29 152 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 ZNF732B4DXR9 585 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 H0YIG0 161 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 K7EQS6 105 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 SLC33A1O00400 549 aaPredicted RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 SIGLEC5O15389 551 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 TRAPPC3O43617 180 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 ZNF354AO60765 605 aaPredicted RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 CALRP27797 417 aaKnown RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 MARCKSP29966 332 aaPredicted RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 ARL2P36404 184 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 ASIC1P78348 528 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 AKAP17AQ02040 695 aaKnown RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 ABRQ12979 859 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 MXD4Q14582 209 aaPredicted RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 SLMAPQ14BN4 828 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 MAPK11Q15759 364 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 FAM182AQ5T1J6 154 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 SLC27A4Q6P1M0 643 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 C17orf107Q6ZR85 190 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 LINC00696Q6ZRV3 163 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 KCNMB4Q86W47 210 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 CACUL1Q86Y37 369 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 GPR65Q8IYL9 337 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 OR9Q2Q8NGE9 314 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 OR5M9Q8NGP3 310 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 UBLCP1Q8WVY7 318 aaPredicted RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 CCDC51Q96ER9 411 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 MSANTD3Q96H12 275 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 C17orf62Q9BQA9 187 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 ZNF350Q9GZX5 532 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 PRORYQ9H606 182 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 ECT2Q9H8V3 914 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 C3orf14Q9HBI5 128 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 ABCB8Q9NUT2 735 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 DUS2Q9NX74 493 aaKnown RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 TDRD6O60522 2096 aaKnown RBP4.1□□□□□ -1.75
COPB1-204ENST00000526191 DOCK9Q9BZ29 2069 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 KNTC1P50748 2209 aa4.1□□□□□ -1.75
COPB1-204ENST00000526191 UTP20O75691 2785 aaKnown RBP4.09□□□□□ -1.75
COPB1-204ENST00000526191 C2orf92A0A1B0GVN3 265 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 ARHGEF33A8MVX0 844 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 LMO7DNF2Z398 122 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 RNF103O00237 685 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 OGTO15294 1046 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 TTI1O43156 1089 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 GLCEO94923 617 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 SERPINF2P08697 491 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 C8orf89P0DMQ9 161 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 ATF6P18850 670 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 GIFP27352 417 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 GNA11P29992 359 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 P2RY2P41231 377 aa4.09□□□□□ -1.75
COPB1-204ENST00000526191 IFNAR2P48551 515 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms