RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PMM1Q92871 262 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 CHMP6Q96FZ7 201 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 ZNF350Q9GZX5 532 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 PAIP1Q9H074 479 aaKnown RBP15.73■□□□□ 0.11
LMX1B-203ENST00000526117 SAP130Q9H0E3 1048 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 SLC6A13Q9NSD5 602 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 FBXO34Q9NWN3 711 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 FLRT3Q9NZU0 649 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 RP1L1Q8IWN7 2480 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-203ENST00000526117 ESPL1Q14674 2120 aa15.73■□□□□ 0.11
LMX1B-203ENST00000526117 NUP214P35658 2090 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-203ENST00000526117 HMGN4O00479 90 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 SLC22A2O15244 555 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 CDC40O60508 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
LMX1B-203ENST00000526117 STX11O75558 287 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 ANGPTL1O95841 491 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 ABOP16442 354 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 CAPN3P20807 821 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 ENDOUP21128 410 aaKnown RBP15.72■□□□□ 0.11
LMX1B-203ENST00000526117 MSX1P28360 303 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 MVDP53602 400 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 DSCR4P56555 118 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-203ENST00000526117 HSF1Q00613 529 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 KLHL26Q53HC5 615 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 CCNJQ5T5M9 372 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 MTFR2Q6P444 385 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 APOOLQ6UXV4 268 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 EID3Q8N140 333 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 DPP10Q8N608 796 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 C10orf82Q8WW14 230 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 SARAFQ96BY9 339 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 OTUB1Q96FW1 271 aaPredicted RBP15.72■□□□□ 0.11
LMX1B-203ENST00000526117 TPT1P8Q9HAU6 139 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 THUMPD1Q9NXG2 353 aaKnown RBP15.72■□□□□ 0.11
LMX1B-203ENST00000526117 PPP4R1LQ9P1A2 415 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 LIPT1Q9Y234 373 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 HRH3Q9Y5N1 445 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 LIPGQ9Y5X9 500 aa15.72■□□□□ 0.11
LMX1B-203ENST00000526117 NCKAP5O14513 1909 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 TRBV5-3A0A0A0MS03 114 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 B4DXG7 233 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 NR5A2O00482 541 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 SCDO00767 359 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 PRRG2O14669 202 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 SCO2O43819 266 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 KIAA0513O60268 411 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 ANP32DO95626 131 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 DCTP40126 519 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 RFX3P48380 749 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 ATP12AP54707 1039 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 FUT5Q11128 374 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 FADDQ13158 208 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 UBAP2LQ14157 1087 aaKnown RBP15.71■□□□□ 0.11
LMX1B-203ENST00000526117 ZNF141Q15928 474 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 GLYR1Q49A26 553 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-203ENST00000526117 FLYWCH1Q4VC44 716 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 C6orf10Q5SRN2 563 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 SLC2A7Q6PXP3 512 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 C16orf62Q7Z3J2 963 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 RNF130Q86XS8 419 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 FAM83FQ8NEG4 500 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-203ENST00000526117 OR2M3Q8NG83 312 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 TRNT1Q96Q11 434 aaKnown RBP15.71■□□□□ 0.11
LMX1B-203ENST00000526117 RTN4RQ9BZR6 473 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 RAD21L1Q9H4I0 556 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 LDAHQ9H6V9 325 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 PCDHB14Q9Y5E9 798 aa15.71■□□□□ 0.11
LMX1B-203ENST00000526117 C2orf72A6NCS6 295 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 NDUFB5O43674 189 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 ACTL6AO96019 429 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 GSNP06396 782 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 HOXD4P09016 255 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 OR12D1P0DN82 309 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 BMP2P12643 396 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 HPGDP15428 266 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 PPIBP23284 216 aaKnown RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 ADH7P40394 386 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 PER3P56645 1201 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 C3AR1Q16581 482 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 COQ5Q5HYK3 327 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 TNFAIP8L2Q6P589 184 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 MARCH3Q86UD3 253 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 DOLPP1Q86YN1 238 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 OR4K17Q8NGC6 315 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 PHF10Q8WUB8 498 aaKnown RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 XAGE5Q8WWM1 108 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 ROPN1LQ96C74 230 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 TP63Q9H3D4 680 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 PTGES2Q9H7Z7 377 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 SPRR3Q9UBC9 169 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 ERRFI1Q9UJM3 462 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 LEF1Q9UJU2 399 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 FBXL2Q9UKC9 423 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 DTNAQ9Y4J8 743 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 NINQ8N4C6 2090 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 USP9XQ93008 2570 aaPredicted RBP15.7■□□□□ 0.1
LMX1B-203ENST00000526117 ZGRF1Q86YA3 2104 aa15.7■□□□□ 0.1
LMX1B-203ENST00000526117 E9PLN8 166 aa15.69■□□□□ 0.1
LMX1B-203ENST00000526117 H3BNH8 94 aa15.69■□□□□ 0.1
LMX1B-203ENST00000526117 LRRTM2O43300 516 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms