RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 TNFRSF10DQ9UBN6 386 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 CBLCQ9ULV8 474 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 ZNF232Q9UNY5 417 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 NTNG1Q9Y2I2 539 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 WDR45Q9Y484 360 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 PLEKHM1Q9Y4G2 1056 aa8.33□□□□□ -1.08
PKP3-202ENST00000524646 CACNA1IQ9P0X4 2223 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TBC1D3KA0A087X1G2 549 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 ANTXRLA6NF34 631 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 UNC119BA6NIH7 251 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ISM1B1AKI9 464 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SOCS6O14544 535 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SCO2O43819 266 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 CH25HO95992 272 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 THY1P04216 161 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 APODP05090 189 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ZNF888P0CJ79 500 aaPredicted RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 SLC2A2P11168 524 aaPredicted RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 CPN2P22792 545 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 APEX1P27695 318 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 SSTR4P31391 388 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 WASP42768 502 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 KIR2DL3P43628 341 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ZNF136P52737 540 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 CAV3P56539 151 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 CLDN20P56880 219 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 KIAA1024LP59773 190 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 RPS21P63220 83 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 EEF1A1P68104 462 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 BTN3A2P78410 334 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 MLLT1Q03111 559 aaPredicted RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 RUNX3Q13761 415 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SF3A2Q15428 464 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 ARHGAP11BQ3KRB8 267 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 C2orf27AQ580R0 203 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 EXOSC6Q5RKV6 272 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TIGD3Q6B0B8 471 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TBC1D3GQ6DHY5 549 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 RPL13AP3Q6NVV1 102 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SMARCD3Q6STE5 483 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 PLET1Q6UQ28 207 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ADGRD2Q7Z7M1 963 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 LHFPL3Q86UP9 236 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 NOXA1Q86UR1 476 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ZNF619Q8N2I2 560 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 OR2L13Q8N349 312 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 Q8N402 240 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TMEM145Q8NBT3 493 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 C19orf18Q8NEA5 215 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 OR52L1Q8NGH7 329 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TMEM255BQ8WV15 326 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 FGF13Q92913 245 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 FAM131CQ96AQ9 280 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SLC35A4Q96G79 324 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SCARF2Q96GP6 870 aaPredicted RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 SAMD8Q96LT4 415 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 FCRL4Q96PJ5 515 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 DCLRE1CQ96SD1 692 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 SECISBP2Q96T21 854 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 SLX1AQ9BQ83 275 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TMEM43Q9BTV4 400 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ZNF350Q9GZX5 532 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 KCNN2Q9H2S1 579 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 SLA2Q9H6Q3 261 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 RBFOX1Q9NWB1 397 aaKnown RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 OR6C2Q9NZP2 312 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 PTGFRNQ9P2B2 879 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 COMMD3Q9UBI1 195 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 MALT1Q9UDY8 824 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 KLHL21Q9UJP4 597 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ZNF223Q9UK11 482 aaPredicted RBP8.32□□□□□ -1.08
PKP3-202ENST00000524646 SLC7A7Q9UM01 511 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 TMEM5Q9Y2B1 443 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 GPSM3Q9Y4H4 160 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 PCDHGB7Q9Y5F8 929 aa8.32□□□□□ -1.08
PKP3-202ENST00000524646 ATG2BQ96BY7 2078 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 A0A1W2PQU0 124 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 SHISA3A0PJX4 238 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 TRAPPC13A5PLN9 417 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 CD8B2A6NJW9 211 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 CENPBD1B2RD01 187 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 FAM25AB3EWG3 89 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 FAM25CB3EWG5 89 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 FAM25GB3EWG6 89 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 J3QRE1 110 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 GTPBP1O00178 669 aaKnown RBP8.31□□□□□ -1.08
PKP3-202ENST00000524646 BTN3A3O00478 584 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 LYRM1O43325 122 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 RNF13O43567 381 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 PLRG1O43660 514 aaKnown RBP8.31□□□□□ -1.08
PKP3-202ENST00000524646 FMO6PO60774 539 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 RNGTTO60942 597 aaKnown RBP8.31□□□□□ -1.08
PKP3-202ENST00000524646 SLC43A1O75387 559 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 NCR1O76036 304 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 LYPD3O95274 346 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 CSF2P04141 144 aa8.31□□□□□ -1.08
PKP3-202ENST00000524646 DBIP07108 87 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms