RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	GDPD4	Q6W3E5	623 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF730	Q6ZMV8	503 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	C20orf204	Q6ZNR8	217 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	MARCH9	Q86YJ5	346 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	GATAD2A	Q86YP4	633 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLCZ1	Q86YW0	608 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAGAP	Q8N103	731 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	LILRA3	Q8N6C8	439 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	EID2	Q8N6I1	236 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NATD1	Q8N6N6	113 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	CHST14	Q8NCH0	376 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	DUSP18	Q8NEJ0	188 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMIE	Q8NEW7	156 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR2A12	Q8NGT7	310 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR5AK3P	Q8NH89	298 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ANGPTL6	Q8NI99	470 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	GRPEL2	Q8TAA5	225 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SAP25	Q8TEE9	199 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF480	Q8WV37	535 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SKA2	Q8WVK7	121 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR5P2	Q8WZ92	322 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM19	Q96HH6	336 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF582	Q96NG8	517 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TEFM	Q96QE5	360 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	IL4I1	Q96RQ9	567 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	GON7	Q9BXV9	100 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	POLR2J2	Q9GZM3	115 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NDEL1	Q9GZM8	345 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	MMP28	Q9H239	520 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM83D	Q9H4H8	585 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SERHL2	Q9H4I8	314 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZDHHC6	Q9H6R6	413 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	RNF121	Q9H920	327 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	ERVMER34-1	Q9H9K5	563 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	RANGRF	Q9HD47	186 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLAMF7	Q9NQ25	335 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	TIGAR	Q9NQ88	270 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	SNTG1	Q9NSN8	517 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	MAN2C1	Q9NTJ4	1040 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	DDX28	Q9NUL7	540 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	GULP1	Q9UBP9	304 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	NUFIP1	Q9UHK0	495 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	CD84	Q9UIB8	345 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	A4GNT	Q9UNA3	340 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	KCNE2	Q9Y6J6	123 aa		7.32	□□□□□ -1.24
SPIDR-223	ENST00000524033	THADA	Q6YHU6	1953 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	GNG14	A0A1W2PPG7	69 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033		A0A1W2PRQ8	180 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	IRGM	A1A4Y4	181 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TRABD2B	A6NFA1	517 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	KDM4E	B2RXH2	506 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM25A	B3EWG3	89 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM25C	B3EWG5	89 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM25G	B3EWG6	89 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PRAMEF26	H0Y7S4	382 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	KPNA3	O00505	521 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	MYL12B	O14950	172 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	YKT6	O15498	198 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PROM1	O43490	865 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PRKY	O43930	277 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	CYP7B1	O75881	506 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	CDRT1	O95170	752 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TBX6	O95947	436 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	C1QB	P02746	253 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	IL3	P08700	152 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	NPPB	P16860	134 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	CPN2	P22792	545 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	ERP29	P30040	261 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FGF9	P31371	208 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SOAT1	P35610	550 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	CHI3L1	P36222	383 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FEN1	P39748	380 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	ETV5	P41161	510 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PREP	P48147	710 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	GZMK	P49863	264 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	ETV1	P50549	477 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	CASP9	P55211	416 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SMIM11A	P58511	58 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAS2R50	P59544	299 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PPP2CB	P62714	309 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	RPS25	P62851	125 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	RAC1	P63000	192 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	PPP2CA	P67775	309 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	MRPS15	P82914	257 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	HNRNPA0	Q13151	305 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	IKZF1	Q13422	519 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	HEPACAM	Q14CZ8	416 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAB1	Q15750	504 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SYTL3	Q4VX76	610 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SYT14P1	Q58G82	188 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAM209A	Q5JX71	171 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SNAP47	Q5SQN1	464 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	DCST1	Q5T197	706 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	AGBL4	Q5VU57	503 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	DHRS13	Q6UX07	377 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC9B2	Q86UD5	537 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	IQCH	Q86VS3	1027 aa		7.31	□□□□□ -1.24
SPIDR-223	ENST00000524033	COMTD1	Q86VU5	262 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms