RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 ZNF570Q96NI8 536 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 ZNF347Q96SE7 839 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 LPAR4Q99677 370 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 BARD1Q99728 777 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 SPRY4Q9C004 299 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 WWTR1Q9GZV5 400 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 MTHFD2LQ9H903 347 aaPredicted RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 SMURF2Q9HAU4 748 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 CTPS2Q9NRF8 586 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 POLE3Q9NRF9 147 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 RLIMQ9NVW2 624 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 KLHL28Q9NXS3 571 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 RHCGQ9UBD6 479 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 CNOT11Q9UKZ1 510 aaKnown RBP6.21□□□□□ -1.42
PVT1-217ENST00000523190 PADI1Q9ULC6 663 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 SLC9A8Q9Y2E8 581 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 IFT52Q9Y366 437 aa6.21□□□□□ -1.42
PVT1-217ENST00000523190 LOC102723996A0A087X1L8 192 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 TRBV11-1A0A0K0K1C0 115 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 G3V2T6 193 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 TNFRSF11BO00300 401 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 FFAR1O14842 300 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 TM4SF5O14894 197 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ADAMDEC1O15204 470 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 DPM1O60762 260 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 SEMA7AO75326 666 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 BCAS1O75363 584 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 REM1O75628 298 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 GADD45GO95257 159 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 IL33O95760 270 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 THBS1P07996 1170 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 CELA2AP08217 269 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 RAB40ALP0C0E4 278 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 NID1P14543 1247 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ACADSP16219 412 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 IL7RP16871 459 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ITGA2P17301 1181 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 RHCEP18577 417 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 TCN2P20062 427 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 DRD5P21918 477 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PRKACGP22612 351 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 IL12BP29460 328 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 OTX2P32243 289 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 RGS8P57771 180 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 DCAF7P61962 342 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 EEF1A1P68104 462 aaKnown RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 RNF4P78317 190 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 GABREP78334 506 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 LSM11P83369 360 aaKnown RBP eCLIP6.2□□□□□ -1.42
PVT1-217ENST00000523190 HOXC5Q00444 222 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 NHLH1Q02575 133 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PLAURQ03405 335 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PLCXD2Q0VAA5 305 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 DNASE1L3Q13609 305 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ZNF141Q15928 474 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.2□□□□□ -1.42
PVT1-217ENST00000523190 EXOC3L2Q2M3D2 409 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 EIPR1Q53HC9 387 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 MRPL2Q5T653 305 aaKnown RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 TCTN3Q6NUS6 607 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 SHQ1Q6PI26 577 aaKnown RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 C16orf47Q6ZP98 133 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 TSPYL5Q86VY4 417 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 HIPK1Q86Z02 1210 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ZDHHC13Q8IUH4 622 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 SLC34A3Q8N130 599 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PACRGLQ8N7B6 248 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ZNF441Q8N8Z8 693 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 OR4C15Q8NGM1 316 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 OR6T1Q8NGN1 323 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 OR52J3Q8NH60 311 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 MAGEE2Q8TD90 523 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 THAP3Q8WTV1 239 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 CNOT9Q92600 299 aaKnown RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 WNT2BQ93097 391 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ARSGQ96EG1 525 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 ZNF597Q96LX8 424 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PIP5K1AQ99755 562 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 G6PC3Q9BUM1 346 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 SEMA4CQ9C0C4 833 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 GABARAPL1Q9H0R8 117 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 FLRT3Q9NZU0 649 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PDP1Q9P0J1 537 aaPredicted RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 TCFL5Q9UL49 500 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 A4GNTQ9UNA3 340 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 PPIEQ9UNP9 301 aaKnown RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 ZNF232Q9UNY5 417 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 NTNG1Q9Y2I2 539 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 FAM32AQ9Y421 112 aaKnown RBP6.2□□□□□ -1.42
PVT1-217ENST00000523190 LYVE1Q9Y5Y7 322 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 HS3ST3B1Q9Y662 390 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 AP4B1Q9Y6B7 739 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 LAMA1P25391 3075 aa6.2□□□□□ -1.42
PVT1-217ENST00000523190 OTOGLQ3ZCN5 2332 aa6.19□□□□□ -1.42
PVT1-217ENST00000523190 IGHV1-45A0A0A0MS14 117 aa6.19□□□□□ -1.42
PVT1-217ENST00000523190 TRBV4-1A0A0J9YWV2 114 aa6.19□□□□□ -1.42
PVT1-217ENST00000523190 LOC101059948A0A1B0GTJ6 334 aa6.19□□□□□ -1.42
PVT1-217ENST00000523190 CDHR4A6H8M9 788 aa6.19□□□□□ -1.42
PVT1-217ENST00000523190 CPSF4LA6NMK7 179 aaKnown RBP6.19□□□□□ -1.42
PVT1-217ENST00000523190 NPIPB9F8W1W9 429 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms