RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	CBWD3	Q5JTY5	395 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	CBWD5	Q5RIA9	395 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	UBXN11	Q5T124	520 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	NAPEPLD	Q6IQ20	393 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	ZNF774	Q6NX45	483 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TRMT10B	Q6PF06	316 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	ZNF790	Q6PG37	636 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TMIGD1	Q6UXZ0	262 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TMUB2	Q71RG4	321 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	SAMD7	Q7Z3H4	446 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TRIM46	Q7Z4K8	759 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TAF8	Q7Z7C8	310 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	ZNF605	Q86T29	641 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	LRRTM1	Q86UE6	522 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	PTRH1	Q86Y79	214 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	CBWD2	Q8IUF1	395 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	KATNAL2	Q8IYT4	538 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	JAGN1	Q8N5M9	183 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	RTL3	Q8N8U3	475 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	RAD54L	Q92698	747 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	UBE2F	Q969M7	185 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	EMID1	Q96A84	441 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	ZNF48	Q96MX3	618 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	WFIKKN1	Q96NZ8	548 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	PNMA5	Q96PV4	448 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	CGRRF1	Q99675	332 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	CBWD1	Q9BRT8	395 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TKTL2	Q9H0I9	626 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	RIOX1	Q9H6W3	641 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	LPAR2	Q9HBW0	351 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	EXOSC4	Q9NPD3	245 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	SLC35D1	Q9NTN3	355 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	KLHL11	Q9NVR0	708 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	COMMD3	Q9UBI1	195 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	SLC9A2	Q9UBY0	812 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	FZD1	Q9UP38	647 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	FBXO7	Q9Y3I1	522 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	DYRK1B	Q9Y463	629 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	OAS3	Q9Y6K5	1087 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	SLCO1B1	Q9Y6L6	691 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	PHIP	Q8WWQ0	1821 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	RGPD1	P0DJD0	1748 aa		4.37	□□□□□ -1.71
PCM1-215	ENST00000522275	MON2	Q7Z3U7	1717 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	TRBV11-1	A0A0K0K1C0	115 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	C20orf202	A1L168	122 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	DRGX	A6NNA5	263 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	FAM171A2	A8MVW0	826 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	TRDC	B7Z8K6	153 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	LRRN3	E7EW58	273 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275		G3V2L1	256 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CLIC1	O00299	241 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ACKR2	O00590	384 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	SDHD	O14521	159 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	GNGT2	O14610	69 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	UBD	O15205	165 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	GGCT	O75223	188 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	MTX2	O75431	263 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CDRT1	O95170	752 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CLDN9	O95484	217 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	PTH	P01270	115 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	MT-ND5	P03915	603 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	VTN	P04004	478 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ADRB2	P07550	413 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	MELTF	P08582	738 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	IRF2	P14316	349 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	TBP	P20226	339 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	RAB5A	P20339	215 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ACKR3	P25106	362 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CERS1	P27544	350 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	SDC4	P31431	198 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ALDH3B1	P43353	468 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CDK8	P49336	464 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	SRP9	P49458	86 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	GSK3B	P49841	420 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ACLY	P53396	1101 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CRISP1	P54107	249 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	CDH11	P55287	796 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	NDUFA6	P56556	154 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	SLC37A1	P57057	533 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	MAP4K2	Q12851	820 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	IL18	Q14116	193 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	TGIF1	Q15583	401 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ST3GAL2	Q16842	350 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	DEFB115	Q30KQ5	88 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	PCID2	Q5JVF3	399 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	PRAMEF8	Q5VWM4	474 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	PRAMEF7	Q5VXH5	474 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	MFSD14C	Q5VZR4	134 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	NSUN5P2	Q63ZY6	315 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	ATG9B	Q674R7	924 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	C19orf48	Q6RUI8	117 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	IL27RA	Q6UWB1	636 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	DEF8	Q6ZN54	512 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	MOB3C	Q70IA8	216 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	TSPAN33	Q86UF1	283 aa		4.36	□□□□□ -1.71
PCM1-215	ENST00000522275	PDZD3	Q86UT5	571 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms