RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 STX7O15400 261 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ZNF208O43345 1280 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 HCKP08631 526 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 IGFBP1P08833 259 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 SNRPCP09234 159 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ZNF10P21506 573 aaPredicted RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 RPS6P62753 249 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 EWSR1Q01844 656 aaKnown RBP eCLIP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 KRTAP1-1Q07627 177 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ZIC1Q15915 447 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 CYS1Q717R9 158 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 EFL1Q7Z2Z2 1120 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 CLDN19Q8N6F1 224 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 PRSS33Q8NF86 280 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 FLVCR1-AS1Q8TAF5 88 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 FNDC8Q8TC99 324 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 RNF139Q8WU17 664 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ATF6BQ99941 703 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 VPS33BQ9H267 617 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ABCC13Q9NSE7 274 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 WWOXQ9NZC7 414 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 NUDT4Q9NZJ9 180 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 PIPOXQ9P0Z9 390 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ASIC3Q9UHC3 531 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 CTNNA3Q9UI47 895 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 PTBP2Q9UKA9 531 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 RPH3ALQ9UNE2 315 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 GMPPBQ9Y5P6 360 aa4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 ZCCHC6Q5VYS8 1495 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-233ENST00000522052 BCORL1Q5H9F3 1711 aa4.09□□□□□ -1.76
CTNNA1-233ENST00000522052 A0A1W2PNV4 684 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 XKRY2A2RUG3 117 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 SOCS3O14543 225 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 PRRG1O14668 218 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 EFNA2O43921 213 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 TPST2O60704 377 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 B4GALT2O60909 372 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 METP08581 1390 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 WNT2P09544 360 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 PGCP20142 388 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 RPL4P36578 427 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 CEBPDP49716 269 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 ATP4BP51164 291 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 MAP2K1Q02750 393 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 PLOD1Q02809 727 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 NUP160Q12769 1436 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 SHROOM2Q13796 1616 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 MESDQ14696 234 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 PCK2Q16822 640 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 GGTA1PQ4G0N0 100 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 C10orf120Q5SQS8 335 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 REP15Q6BDI9 236 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 ARMCX5Q6P1M9 558 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 ZYG11AQ6WRX3 759 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 STAC2Q6ZMT1 411 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 PRSS48Q7RTY5 328 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 C16orf62Q7Z3J2 963 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 CATSPER3Q86XQ3 398 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 VSTM4Q8IW00 320 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 CDH26Q8IXH8 852 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 UBQLNLQ8IYU4 475 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 ARL14Q8N4G2 192 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 ZSCAN4Q8NAM6 433 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 SUMF1Q8NBK3 374 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 OR8J1Q8NGP2 316 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 TBCKQ8TEA7 893 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 NPRL2Q8WTW4 380 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 PIGCQ92535 297 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 SDSLQ96GA7 329 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 COQ2Q96H96 371 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 SH3YL1Q96HL8 342 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 SLC45A3Q96JT2 553 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 C7orf34Q96L11 122 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 AMDHD1Q96NU7 426 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 OPRPNQ99935 248 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 TMEM43Q9BTV4 400 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 CCDC28BQ9BUN5 200 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 GON7Q9BXV9 100 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 TM9SF3Q9HD45 589 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 FANCFQ9NPI8 374 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 ZDHHC18Q9NUE0 388 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 NMRK1Q9NWW6 199 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 HYPKQ9NX55 129 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 CRLS1Q9UJA2 301 aa4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 BARX2Q9UMQ3 279 aaPredicted RBP4.08□□□□□ -1.76
CTNNA1-233ENST00000522052 RIMS1Q86UR5 1692 aaKnown RBP4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 POLA1P09884 1462 aaPredicted RBP4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 TRAV26-1A0A087WT03 109 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 FOXI3A8MTJ6 420 aaPredicted RBP4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 ARHGEF9O43307 516 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 TSC22D2O75157 780 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 SEMA4FO95754 770 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 IGHV3-9P01782 118 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 HBQ1P09105 142 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 TRIM49P0CI25 452 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 TRIM49CP0CI26 452 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 LMO2P25791 158 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 LAP3P28838 519 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 CAPGP40121 348 aa4.07□□□□□ -1.76
CTNNA1-233ENST00000522052 GRIA1P42261 906 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms