RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 ARHGAP19Q14CB8 494 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 ADIPOQQ15848 244 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SLC5A12Q1EHB4 618 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 LCE1AQ5T7P2 110 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 FAM45BPQ6NSW5 357 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PWWP2BQ6NUJ5 590 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PIWIL4Q7Z3Z4 852 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 VASH2Q86V25 355 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 OR9A1PQ8NGU1 263 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 OR8K5Q8NH50 307 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 FLVCR1-AS1Q8TAF5 88 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 HMGCLL1Q8TB92 370 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 FAM45AQ8TCE6 357 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 TMED6Q8WW62 240 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 N4BP2L2Q92802 583 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 LINGO1Q96FE5 620 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 PKP4Q99569 1192 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 BARD1Q99728 777 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 FAM129AQ9BZQ8 928 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 TSPYL1Q9H0U9 437 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 HIPK2Q9H2X6 1198 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 FANCEQ9HB96 536 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SYTL2Q9HCH5 934 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 ZDHHC18Q9NUE0 388 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SPATA7Q9P0W8 599 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 TXNDC16Q9P2K2 825 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 MTRF1LQ9UGC7 380 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 TMEM184BQ9Y519 407 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 MAU2Q9Y6X3 613 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 TP53BP1Q12888 1972 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 URB1O60287 2271 aaKnown RBP6.43□□□□□ -1.38
SDCBP-208ENST00000520228 CELSR3Q9NYQ7 3312 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 BAHCC1Q9P281 2608 aa6.43□□□□□ -1.38
SDCBP-208ENST00000520228 SCN8AQ9UQD0 1980 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 WDFY3Q8IZQ1 3526 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 FAM159BA6NKW6 160 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 TMEM150CB9EJG8 249 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 SLC16A5O15375 505 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 SCRG1O75711 98 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 SLC16A8O95907 504 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 MT-ND3P03897 115 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 C8GP07360 202 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 PLA2G2AP14555 144 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 MAGP20916 626 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 TNFRSF8P28908 595 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 OAS2P29728 719 aaKnown RBP6.42□□□□□ -1.38
SDCBP-208ENST00000520228 RPA3P35244 121 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-208ENST00000520228 CASP2P42575 452 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 DSCR9P59020 149 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 TSTA3Q13630 321 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-208ENST00000520228 ZIC1Q15915 447 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 FAM205BPQ63HN1 556 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 CDHR3Q6ZTQ4 885 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 TIPARPQ7Z3E1 657 aaKnown RBP6.42□□□□□ -1.38
SDCBP-208ENST00000520228 TMEM126BQ8IUX1 230 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 CTAGE3PQ8IX95 158 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 DSELQ8IZU8 1212 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 OR1L3Q8NH93 324 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 MCOLN3Q8TDD5 553 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 SMPDL3AQ92484 453 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 KIAA1143Q96AT1 154 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-208ENST00000520228 ZNF501Q96CX3 271 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-208ENST00000520228 SCMH1Q96GD3 660 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 VPS39Q96JC1 886 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 CMTM3Q96MX0 182 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 OLFM1Q99784 485 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 CHRNA10Q9GZZ6 450 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 RHOJQ9H4E5 214 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 PRORYQ9H606 182 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 PARVBQ9HBI1 364 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 FAM60AQ9NP50 221 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 PADI1Q9ULC6 663 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 KLHL20Q9Y2M5 609 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 PLXNB3Q9ULL4 1909 aa6.42□□□□□ -1.38
SDCBP-208ENST00000520228 LAMA5O15230 3695 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 AHCTF1Q8WYP5 2266 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 PTPRBP23467 1997 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 IGLV5-37A0A075B6J1 123 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 A0A1W2PPV9 198 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 E7EQ34 232 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 K7ENP7 123 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 SLC28A2O43868 658 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 JRKO75564 520 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 OR2B3O76000 313 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 TSPAN12O95859 305 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 KLK3P07288 261 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-208ENST00000520228 HIST1H2AGP0C0S8 130 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-208ENST00000520228 ERGP11308 486 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 LIFP15018 202 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 HIST1H2ADP20671 130 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 CYP2A7P20853 494 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 PSMB5P28074 263 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 CMPK1P30085 196 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 GP5P40197 560 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 HNRNPH2P55795 449 aaKnown RBP6.41□□□□□ -1.38
SDCBP-208ENST00000520228 TAS2R39P59534 338 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 TUBA1BP68363 451 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 MYBPHQ13203 477 aa6.41□□□□□ -1.38
SDCBP-208ENST00000520228 SRSF6Q13247 344 aaKnown RBP6.41□□□□□ -1.38
SDCBP-208ENST00000520228 FASTKQ14296 549 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms