RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ANKFN1Q8N957 763 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 TMEM178AQ8NBL3 297 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 PSD4Q8NDX1 1056 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 CATSPER1Q8NEC5 780 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 OR10G3Q8NGC4 313 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 SPPL2AQ8TCT8 520 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 PAQR8Q8TEZ7 354 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 PMM1Q92871 262 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 UBL7Q96S82 380 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-205ENST00000518196 TMEM38AQ9H6F2 299 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 METTL7AQ9H8H3 244 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 CACYBPQ9HB71 228 aaKnown RBP11.92□□□□□ -0.5
PABPC1-205ENST00000518196 SPAG4Q9NPE6 437 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 FBXO34Q9NWN3 711 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 ADA2Q9NZK5 511 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 KLF13Q9Y2Y9 288 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-205ENST00000518196 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 PCDHGB6Q9Y5F9 930 aa11.92□□□□□ -0.5
PABPC1-205ENST00000518196 CHCHD2Q9Y6H1 151 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-205ENST00000518196 NINQ8N4C6 2090 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 LAMA5O15230 3695 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CACNA1BQ00975 2339 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 A0A0G2JPF8 293 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 HNRNPCL2B2RXH8 293 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 HNRNPCL3B7ZW38 293 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 HNRNPCL1O60812 293 aaKnown RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 DNAJA2O60884 412 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ICOSLGO75144 302 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 H6PDO95479 791 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 TFPTP0C1Z6 253 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 HNRNPCL4P0DMR1 293 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CCL3P10147 92 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CNR1P21554 472 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 MSX1P28360 303 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CD97P48960 835 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 RASSF2P50749 326 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 EEFSECP57772 596 aaKnown RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CDK6Q00534 326 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 GABPB1Q06547 395 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 BNIP1Q12981 228 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 SCARB2Q14108 478 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF169Q14929 603 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 GPR68Q15743 365 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 GRAMD1BQ3KR37 738 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 FLYWCH1Q4VC44 716 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 PRAMEF8Q5VWM4 474 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 PRAMEF7Q5VXH5 474 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 REEP3Q6NUK4 255 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ERICH5Q6P6B1 374 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 TMEM81Q6P7N7 255 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 Q6ZS92 163 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 MDGA2Q7Z553 956 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 NET1Q7Z628 596 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF227Q86WZ6 799 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CALHM3Q86XJ0 350 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 DEFB107AQ8IZN7 70 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF619Q8N2I2 560 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 RBMXL3Q8N7X1 1067 aaKnown RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF527Q8NB42 609 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 FAM98AQ8NCA5 519 aaKnown RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 SLC38A5Q8WUX1 472 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 NODALQ96S42 347 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF350Q9GZX5 532 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 PIF1Q9H611 641 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 MTHFD2LQ9H903 347 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 HHATLQ9HCP6 504 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 SH2D2AQ9NP31 389 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 KLHL1Q9NR64 748 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 UBQLN4Q9NRR5 601 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CMTM6Q9NX76 183 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 CNOT11Q9UKZ1 510 aaKnown RBP11.91□□□□□ -0.5
PABPC1-205ENST00000518196 ANGPT4Q9Y264 503 aa11.91□□□□□ -0.5
PABPC1-205ENST00000518196 PRAMEF27A3QJZ7 478 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 ANKRD33BA6NCL7 494 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 PRAMEF25A6NGN4 478 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 FAM220BPB1ANY3 271 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 KLRC4-KLRK1H3BQV0 150 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 SCDO00767 359 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 NME2P1O60361 137 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 FCMRO60667 390 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 ICMTO60725 284 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 NGFRP08138 427 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 CHRM4P08173 479 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 SNRPBP14678 240 aaKnown RBP11.9□□□□□ -0.5
PABPC1-205ENST00000518196 TBXA2RP21731 343 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 NME2P22392 152 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 DCTP40126 519 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 CASP3P42574 277 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 GZMMP51124 257 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 ATP12AP54707 1039 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 CHRNEQ04844 493 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 LIPEQ05469 1076 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 FUT5Q11128 374 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 SNTA1Q13424 505 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 LY6DQ14210 128 aa11.9□□□□□ -0.5
PABPC1-205ENST00000518196 ARSJQ5FYB0 599 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms