RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TCF4P15884 667 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 GCH1P30793 250 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 CXCL5P42830 114 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 OR3A1P47881 315 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 RPL29P47914 159 aaKnown RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 GMPSP49915 693 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 TKTL1P51854 596 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 CSNK1G2P78368 415 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 MRPS11P82912 194 aaKnown RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 SPIBQ01892 262 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 CDC20Q12834 499 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 GRB7Q14451 532 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 HEPACAMQ14CZ8 416 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 OR1C1Q15619 314 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 KLF17Q5JT82 389 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 SNRNP48Q6IEG0 339 aaKnown RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 STEAP1BQ6NZ63 245 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 UNQ9370/PRO34162Q6UXP9 181 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 RFLNAQ6ZTI6 216 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 CAMK2N1Q7Z7J9 78 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 C15orf56Q8N910 161 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 TC2NQ8N9U0 490 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 POGLUT1Q8NBL1 392 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 RAB7BQ96AH8 199 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 BMFQ96LC9 184 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 LINC00615Q96LM1 132 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 RNF5Q99942 180 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 TEX12Q9BXU0 123 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 UNC45AQ9H3U1 944 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 NRN1Q9NPD7 142 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 EIF2B3Q9NR50 452 aaKnown RBP-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 PDRG1Q9NUG6 133 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 GIMAP4Q9NUV9 329 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 SLC25A37Q9NYZ2 338 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 EPS15L1Q9UBC2 864 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 GIMAP2Q9UG22 337 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 TUBGCP4Q9UGJ1 667 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 SWAP70Q9UH65 585 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 BTNL2Q9UIR0 455 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 TRAPPC4Q9Y296 219 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 SIGLEC9Q9Y336 463 aa-0.69□□□□□ -2.52
SCARNA23-201ENST00000516060 CARMIL3Q8ND23 1372 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SCN4AP35499 1836 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SMIM28A0A1B0GU29 152 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 H0YL77 283 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 RANBP6O60518 1105 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 TBX18O95935 607 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 CHRNA1P02708 482 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 FCER2P06734 321 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 GIPP09681 153 aaPredicted RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF806P0C7X5 589 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SPP1P10451 314 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 ALOX12P18054 663 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 CSRP1P21291 193 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PSMC6P62333 389 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 FKBP1BP68106 108 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PITPNAQ00169 270 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PLOD1Q02809 727 aaPredicted RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PPIDQ08752 370 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SMARCB1Q12824 385 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PKN2Q16513 984 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 MEA1Q16626 185 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 HAGHQ16775 308 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PARP10Q53GL7 1025 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 HAUS3Q68CZ6 603 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 TXNRD3NBQ6F5E7 133 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SPINT4Q6UDR6 99 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 ZNF567Q8N184 647 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 OR8H1Q8NGG4 311 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PRPF31Q8WWY3 499 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 MRPS27Q92552 414 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 TIMD4Q96H15 378 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SSX3Q99909 188 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 SLC25A22Q9H936 323 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 CALHM2Q9HA72 323 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 PNPLA3Q9NST1 481 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 TECRQ9NZ01 308 aaKnown RBP-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 EHFQ9NZC4 300 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 ICE1Q9Y2F5 2266 aa-0.7□□□□□ -2.52
SCARNA23-201ENST00000516060 TET2Q6N021 2002 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 APCP25054 2843 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SYNJ2O15056 1496 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 TRBV7-9A0A0J9YWB2 115 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 AGAP14A8MT82 685 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 E7EQL1 145 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 M0R296 226 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 TLR4O00206 839 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SYT7O43581 403 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 MBL2P11226 248 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SAT1P21673 171 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 MC1RQ01726 317 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SNTB2Q13425 540 aaKnown RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SMC1AQ14683 1233 aaKnown RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 SPHARQ15513 63 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 LRRC73Q5JTD7 316 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 PRR5LQ6MZQ0 368 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 ATRAIDQ6UW56 229 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 WDR86Q86TI4 376 aa-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 RALGPS2Q86X27 583 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA23-201ENST00000516060 FAM219AQ8IW50 185 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms