RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 DNASE1P24855 282 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 LCN1P31025 176 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 FRKP42685 505 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-215ENST00000515516 SERPINB4P48594 390 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 MLC1Q15049 377 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 TESK1Q15569 626 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 SGCBQ16585 318 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 UGT3A2Q3SY77 523 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 SPDYE7PQ495Y7 208 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 CPTPQ5TA50 214 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 WDR93Q6P2C0 686 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 FIGNL1Q6PIW4 674 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 PLXDC2Q6UX71 529 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 COX18Q8N8Q8 333 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 CNEP1R1Q8N9A8 125 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 FNDC5Q8NAU1 212 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 OR5M1Q8NGP8 315 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 FBXO30Q8TB52 745 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 SMPDL3BQ92485 455 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 NRGNQ92686 78 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 G6PC3Q9BUM1 346 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 ZCCHC3Q9NUD5 404 aaKnown RBP12.35□□□□□ -0.43
TCOF1-215ENST00000515516 NTMQ9P121 344 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 NDRG3Q9UGV2 375 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 ATP6V1HQ9UI12 483 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 PACSIN3Q9UKS6 424 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 EIF3LQ9Y262 564 aaKnown RBP12.35□□□□□ -0.43
TCOF1-215ENST00000515516 ZNF337Q9Y3M9 751 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 AP4B1Q9Y6B7 739 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 PDZD2O15018 2839 aa12.35□□□□□ -0.43
TCOF1-215ENST00000515516 A0A087WZY1 265 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 IGLV3-32A0A0A0MS00 114 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 OR2M5A3KFT3 312 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 SCDO00767 359 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 RGS16O15492 202 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 TNFRSF21O75509 655 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 SKAP2O75563 359 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 SMNDC1O75940 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 KCNK2O95069 426 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 GOSR1O95249 250 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 TGM6O95932 706 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 IGKV1D-16P01601 117 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 BPGMP07738 259 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 ACP2P11117 423 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 EFNA1P20827 205 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 ATP6V1C1P21283 382 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 TBXA2RP21731 343 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 CPOXP36551 454 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 IST1P53990 364 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 MAD2L1Q13257 205 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 FGFBP1Q14512 234 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 LSM12Q3MHD2 195 aaKnown RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 KRT71Q3SY84 523 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 IL23RQ5VWK5 629 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 MFSD12Q6NUT3 480 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 GALNT10Q86SR1 603 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 CDC20BQ86Y33 519 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 MISPQ8IVT2 679 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 SLC16A11Q8NCK7 471 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 OR7A2PQ8NGA2 310 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 OR5P2Q8WZ92 322 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 HOXB13Q92826 284 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 TUBGCP3Q96CW5 907 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 DACH2Q96NX9 599 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 C1orf50Q9BV19 199 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 PINK1Q9BXM7 581 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 RTN4RQ9BZR6 473 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 UBQLN4Q9NRR5 601 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 GALNT8Q9NY28 637 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 ZDHHC2Q9UIJ5 367 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 FAF1Q9UNN5 650 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-215ENST00000515516 OTOGQ6ZRI0 2925 aa12.34□□□□□ -0.43
TCOF1-215ENST00000515516 NCKAP5O14513 1909 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 FAM221AA4D161 298 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 A8MXE2 369 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 B4DXG7 233 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 ALG1L2C9J202 215 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 MSTNO14793 375 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 CFLARO15519 480 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 SOX30O94993 753 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 OXSR1O95747 527 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 NGFRP08138 427 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 KRT16P08779 473 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 PRPS1L1P21108 318 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 MAP3K8P41279 467 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 ZNF41P51814 821 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 POU6F2P78424 691 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 DUSP5Q16690 384 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 XKR7Q5GH72 579 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 C6orf136Q5SQH8 315 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
TCOF1-215ENST00000515516 WDR75Q8IWA0 830 aaKnown RBP12.33□□□□□ -0.44
TCOF1-215ENST00000515516 GATSQ8NAP1 163 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms