RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 OR6K3Q8NGY3 331 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 OR6S1Q8NH40 331 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.48
SMAD1-215ENST00000515385 SLC5A11Q8WWX8 675 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 SORCS1Q8WY21 1168 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.48
SMAD1-215ENST00000515385 PNPLA2Q96AD5 504 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 MYEOVQ96EZ4 313 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 UTP23Q9BRU9 249 aaKnown RBP12.02□□□□□ -0.48
SMAD1-215ENST00000515385 ZNF649Q9BS31 505 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 FNDC11Q9BVV2 318 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 SORBS1Q9BX66 1292 aaKnown RBP12.02□□□□□ -0.48
SMAD1-215ENST00000515385 ARL6Q9H0F7 186 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 ZFYVE1Q9HBF4 777 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 SGK2Q9HBY8 427 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 TXNRD2Q9NNW7 524 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 IL26Q9NPH9 171 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 ACSL6Q9UKU0 697 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 PTPRDP23468 1912 aa12.02□□□□□ -0.48
SMAD1-215ENST00000515385 A0A1B0GWJ7 208 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 ARL5CA6NH57 179 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 NEDD8-MDP1E9PL57 170 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 GFYI3L273 518 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 CLN5O75503 358 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 CLDN11O75508 207 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 STX11O75558 287 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 REM1O75628 298 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 S100A8P05109 93 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 URODP06132 367 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 CD22P20273 847 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 RAB3BP20337 219 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 DRD5P21918 477 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 SOAT1P35610 550 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 MECP2P51608 486 aaKnown RBP12.02□□□□□ -0.49
SMAD1-215ENST00000515385 FGL2Q14314 439 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 INSL4Q14641 139 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 DUSP28Q4G0W2 176 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 C10orf120Q5SQS8 335 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 AADACL4Q5VUY2 407 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 PRAMEF18Q5VWM3 479 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 CXorf57Q6NSI4 855 aaKnown RBP12.02□□□□□ -0.49
SMAD1-215ENST00000515385 C5orf46Q6UWT4 87 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 CXXC5Q7LFL8 322 aaKnown RBP12.02□□□□□ -0.49
SMAD1-215ENST00000515385 SEMA4CQ9C0C4 833 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 NKIRAS2Q9NYR9 191 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 A4GNTQ9UNA3 340 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 ST3GAL5Q9UNP4 418 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 ENTPD4Q9Y227 616 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 PCDHB9Q9Y5E1 797 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 BACE2Q9Y5Z0 518 aa12.02□□□□□ -0.49
SMAD1-215ENST00000515385 A0A0G2JK05 382 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ANKRD61A6NGH8 418 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF749O43361 778 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 RAD1O60671 282 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SEMA7AO75326 666 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 CDC123O75794 336 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 UBBP0CG47 229 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 UBCP0CG48 685 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SHC1P29353 583 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 HTR1FP30939 366 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SPAM1P38567 509 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 GDNFP39905 211 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 OPRD1P41143 372 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 CAPZA2P47755 286 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 DLX5P56178 289 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 RPS27AP62979 156 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 UBA52P62987 128 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ERVK-25P63136 954 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 PTPRRQ15256 657 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 MAPK14Q16539 360 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF792Q3KQV3 632 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF528Q3MIS6 628 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 FAM76BQ5HYJ3 339 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 RTP2Q5QGT7 225 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF626Q68DY1 528 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF660Q6AZW8 331 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 HAGHLQ6PII5 290 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 KLHDC8AQ8IYD2 350 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 CFAP52Q8N1V2 620 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SVBPQ8N300 66 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 C12orf45Q8N5I9 185 aaPredicted RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 OR51Q1Q8NH59 317 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 NARS2Q96I59 477 aaKnown RBP12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZFP3Q96NJ6 502 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 TM6SF2Q9BZW4 377 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 MVB12BQ9H7P6 319 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 BEX1Q9HBH7 125 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 MYNNQ9NPC7 610 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 ZDHHC3Q9NYG2 299 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 CFAP97Q9P2B7 532 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 EDARQ9UNE0 448 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 SCN8AQ9UQD0 1980 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 MYO16Q9Y6X6 1858 aa12.01□□□□□ -0.49
SMAD1-215ENST00000515385 A0A0G2JLL6 359 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms