RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ST13P50502 369 aaKnown RBP19.26■□□□□ 0.67
LSM6-207ENST00000515311 ATP12AP54707 1039 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 SNTA1Q13424 505 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 OR1C1Q15619 314 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 GPR68Q15743 365 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 ZNF141Q15928 474 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 GRAMD1BQ3KR37 738 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 RPS26P11Q5JNZ5 115 aaPredicted RBP19.26■□□□□ 0.67
LSM6-207ENST00000515311 C19orf48Q6RUI8 117 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 CCDC80Q76M96 950 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 OLIG3Q7RTU3 272 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 KRT73Q86Y46 540 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 MDS2Q8NDY4 140 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 OR4C3Q8NH37 302 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 ARHGAP9Q9BRR9 750 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 CADM1Q9BY67 442 aaKnown RBP19.26■□□□□ 0.67
LSM6-207ENST00000515311 MMADHCQ9H3L0 296 aaPredicted RBP19.26■□□□□ 0.67
LSM6-207ENST00000515311 TIMMDC1Q9NPL8 285 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 CNTRLQ7Z7A1 2325 aa19.26■□□□□ 0.67
LSM6-207ENST00000515311 ANKRD33BA6NCL7 494 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 AGAP5A6NIR3 686 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 FADS1O60427 444 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 PDE9AO76083 593 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 F10P00742 488 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 FAM87AP0C7U9 286 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 RPS4Y1P22090 263 aaKnown RBP19.25■□□□□ 0.67
LSM6-207ENST00000515311 EVI2BP34910 448 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 PGM1P36871 562 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 TNFSF10P50591 281 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 BNIP2Q12982 314 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 SLC22A10Q63ZE4 541 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 DESI1Q6ICB0 168 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 PATL1Q86TB9 770 aaKnown RBP19.25■□□□□ 0.67
LSM6-207ENST00000515311 PTRH1Q86Y79 214 aaKnown RBP19.25■□□□□ 0.67
LSM6-207ENST00000515311 FBXW8Q8N3Y1 598 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 ZADH2Q8N4Q0 377 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 PSD4Q8NDX1 1056 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 MCUR1Q96AQ8 359 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 SIGLEC12Q96PQ1 595 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 NODALQ96S42 347 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 ZNF607Q96SK3 696 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 FLRT3Q9NZU0 649 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 PACSIN3Q9UKS6 424 aa19.25■□□□□ 0.67
LSM6-207ENST00000515311 CNOT11Q9UKZ1 510 aaKnown RBP19.25■□□□□ 0.67
LSM6-207ENST00000515311 ATMQ13315 3056 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 A0A1W2PQD3 144 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 PRAMEF25A6NGN4 478 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 SCDO00767 359 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 GSTA4O15217 222 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 GCM2O75603 506 aaPredicted RBP19.24■□□□□ 0.67
LSM6-207ENST00000515311 SLC25A12O75746 678 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 UGT2B17O75795 530 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 OXSR1O95747 527 aaPredicted RBP19.24■□□□□ 0.67
LSM6-207ENST00000515311 PDGFAP04085 211 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 DBIP07108 87 aaKnown RBP19.24■□□□□ 0.67
LSM6-207ENST00000515311 HPGDP15428 266 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 GGT1P19440 569 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 ME2P23368 584 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 KLHL26Q53HC5 615 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 TBCELQ5QJ74 424 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 SPINK14Q6IE38 97 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 PGM2L1Q6PCE3 622 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 MDGA2Q7Z553 956 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 PEX5LQ8IYB4 626 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 POGLUT1Q8NBL1 392 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 FAM156AQ8NDB6 213 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 C9orf43Q8TAL5 461 aaPredicted RBP19.24■□□□□ 0.67
LSM6-207ENST00000515311 GRHL3Q8TE85 626 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 SPATA5L1Q9BVQ7 753 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 MUC13Q9H3R2 512 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 METTL7AQ9H8H3 244 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 SACM1LQ9NTJ5 587 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 KCNE5Q9UJ90 142 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 PCDHGB6Q9Y5F9 930 aa19.24■□□□□ 0.67
LSM6-207ENST00000515311 GPC6Q9Y625 555 aaPredicted RBP19.24■□□□□ 0.67
LSM6-207ENST00000515311 ALG1L2C9J202 215 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CXCR6O00574 342 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 SERPINB7O75635 380 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 PDE5AO76074 875 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 P04436 131 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 THBS1P07996 1170 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CCL3P10147 92 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CD46P15529 392 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 TCN1P20061 433 aaPredicted RBP19.23■□□□□ 0.67
LSM6-207ENST00000515311 AQP1P29972 269 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CASP3P42574 277 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CLK3P49761 638 aaKnown RBP19.23■□□□□ 0.67
LSM6-207ENST00000515311 ULK2Q8IYT8 1036 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 NTNG2Q96CW9 530 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 ZG16BQ96DA0 208 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CLPTM1LQ96KA5 538 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 C5orf34Q96MH7 638 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 ANGPTL4Q9BY76 406 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 TBL1XR1Q9BZK7 514 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.23■□□□□ 0.67
LSM6-207ENST00000515311 CACYBPQ9HB71 228 aaKnown RBP19.23■□□□□ 0.67
LSM6-207ENST00000515311 MAGEL2Q9UJ55 1249 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 TP53TG5Q9Y2B4 290 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 IFT52Q9Y366 437 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 DTNAQ9Y4J8 743 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms