RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 BTNL2Q9UIR0 455 aa8.82□□□□□ -1
RNF4-221ENST00000513643 ACAD8Q9UKU7 415 aa8.82□□□□□ -1
RNF4-221ENST00000513643 RNF6Q9Y252 685 aa8.82□□□□□ -1
RNF4-221ENST00000513643 PCNX3Q9H6A9 2034 aa8.81□□□□□ -1
RNF4-221ENST00000513643 ANKHD1Q8IWZ3 2542 aaKnown RBP8.81□□□□□ -1
RNF4-221ENST00000513643 CACNA1DQ01668 2161 aa8.81□□□□□ -1
RNF4-221ENST00000513643 A0A1W2PQD3 144 aa8.81□□□□□ -1
RNF4-221ENST00000513643 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
RNF4-221ENST00000513643 E9PBE3 544 aa8.81□□□□□ -1
RNF4-221ENST00000513643 TRAPPC6AO75865 159 aa8.81□□□□□ -1
RNF4-221ENST00000513643 CLDN14O95500 239 aa8.81□□□□□ -1
RNF4-221ENST00000513643 OXSR1O95747 527 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 CHMP24386 653 aa8.81□□□□□ -1
RNF4-221ENST00000513643 ADH7P40394 386 aa8.81□□□□□ -1
RNF4-221ENST00000513643 LHX2P50458 406 aa8.81□□□□□ -1
RNF4-221ENST00000513643 CLNS1AP54105 237 aaKnown RBP8.81□□□□□ -1
RNF4-221ENST00000513643 DSCR4P56555 118 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 CLDN15P56746 228 aa8.81□□□□□ -1
RNF4-221ENST00000513643 PMPCAQ10713 525 aa8.81□□□□□ -1
RNF4-221ENST00000513643 LASP1Q14847 261 aaKnown RBP8.81□□□□□ -1
RNF4-221ENST00000513643 BCL2A1Q16548 175 aa8.81□□□□□ -1
RNF4-221ENST00000513643 PGS1Q32NB8 556 aa8.81□□□□□ -1
RNF4-221ENST00000513643 GLYR1Q49A26 553 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 ACSF3Q4G176 576 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 PDCD4Q53EL6 469 aaKnown RBP8.81□□□□□ -1
RNF4-221ENST00000513643 KLHL26Q53HC5 615 aa8.81□□□□□ -1
RNF4-221ENST00000513643 C1orf185Q5T7R7 199 aa8.81□□□□□ -1
RNF4-221ENST00000513643 RIPPLY2Q5TAB7 128 aa8.81□□□□□ -1
RNF4-221ENST00000513643 ANXA8L1Q5VT79 327 aa8.81□□□□□ -1
RNF4-221ENST00000513643 NSUN5P2Q63ZY6 315 aa8.81□□□□□ -1
RNF4-221ENST00000513643 SAXO2Q658L1 398 aa8.81□□□□□ -1
RNF4-221ENST00000513643 SP5Q6BEB4 398 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 OR5M10Q6IEU7 315 aa8.81□□□□□ -1
RNF4-221ENST00000513643 HEPHL1Q6MZM0 1159 aa8.81□□□□□ -1
RNF4-221ENST00000513643 B3GNT6Q6ZMB0 384 aa8.81□□□□□ -1
RNF4-221ENST00000513643 C6orf120Q7Z4R8 191 aa8.81□□□□□ -1
RNF4-221ENST00000513643 YRDCQ86U90 279 aaKnown RBP8.81□□□□□ -1
RNF4-221ENST00000513643 MARCH3Q86UD3 253 aa8.81□□□□□ -1
RNF4-221ENST00000513643 GLB1L3Q8NCI6 653 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 CHDHQ8NE62 594 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 ZPLD1Q8TCW7 415 aa8.81□□□□□ -1
RNF4-221ENST00000513643 DUSP19Q8WTR2 217 aa8.81□□□□□ -1
RNF4-221ENST00000513643 CKAP2Q8WWK9 683 aa8.81□□□□□ -1
RNF4-221ENST00000513643 SLC9A6Q92581 669 aa8.81□□□□□ -1
RNF4-221ENST00000513643 RND1Q92730 232 aa8.81□□□□□ -1
RNF4-221ENST00000513643 ABTB1Q969K4 478 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 C1GALT1C1Q96EU7 318 aa8.81□□□□□ -1
RNF4-221ENST00000513643 RMND5BQ96G75 393 aaPredicted RBP8.81□□□□□ -1
RNF4-221ENST00000513643 SAP130Q9H0E3 1048 aa8.81□□□□□ -1
RNF4-221ENST00000513643 ENKD1Q9H0I2 346 aa8.81□□□□□ -1
RNF4-221ENST00000513643 SLC52A3Q9NQ40 469 aa8.81□□□□□ -1
RNF4-221ENST00000513643 UBQLN4Q9NRR5 601 aa8.81□□□□□ -1
RNF4-221ENST00000513643 SLC6A5Q9Y345 797 aa8.81□□□□□ -1
RNF4-221ENST00000513643 USH1CQ9Y6N9 552 aa8.81□□□□□ -1
RNF4-221ENST00000513643 PDZD2O15018 2839 aa8.8□□□□□ -1
RNF4-221ENST00000513643 A0A0G2JNJ9 132 aa8.8□□□□□ -1
RNF4-221ENST00000513643 GOLGA8QA0A0J9YX86 632 aa8.8□□□□□ -1
RNF4-221ENST00000513643 GOLGA8OA6NCC3 632 aa8.8□□□□□ -1
RNF4-221ENST00000513643 MBD3L4A6NDZ8 208 aaPredicted RBP8.8□□□□□ -1
RNF4-221ENST00000513643 MBD3L3A6NE82 208 aaPredicted RBP8.8□□□□□ -1
RNF4-221ENST00000513643 MBD3L5A6NJ08 208 aaPredicted RBP8.8□□□□□ -1
RNF4-221ENST00000513643 CD8B2A6NJW9 211 aa8.8□□□□□ -1
RNF4-221ENST00000513643 KDM4EB2RXH2 506 aaPredicted RBP8.8□□□□□ -1
RNF4-221ENST00000513643 GOLGA8NF8WBI6 632 aa8.8□□□□□ -1
RNF4-221ENST00000513643 C19orf84I3L1E1 186 aa8.8□□□□□ -1
RNF4-221ENST00000513643 DNAJA2O60884 412 aa8.8□□□□□ -1
RNF4-221ENST00000513643 ANGPTL1O95841 491 aa8.8□□□□□ -1
RNF4-221ENST00000513643 C1QCP02747 245 aa8.8□□□□□ -1
RNF4-221ENST00000513643 PGRP06401 933 aa8.8□□□□□ -1
RNF4-221ENST00000513643 KRT16P08779 473 aa8.8□□□□□ -1
RNF4-221ENST00000513643 KITP10721 976 aa8.8□□□□□ -1
RNF4-221ENST00000513643 IDO1P14902 403 aa8.8□□□□□ -1
RNF4-221ENST00000513643 ZNF708P17019 499 aa8.8□□□□□ -1
RNF4-221ENST00000513643 UQCRC2P22695 453 aa8.8□□□□□ -1
RNF4-221ENST00000513643 PSMA4P25789 261 aaKnown RBP8.8□□□□□ -1
RNF4-221ENST00000513643 DPP4P27487 766 aa8.8□□□□□ -1
RNF4-221ENST00000513643 HTR1EP28566 365 aa8.8□□□□□ -1
RNF4-221ENST00000513643 CHRNB4P30926 498 aa8.8□□□□□ -1
RNF4-221ENST00000513643 TIMP3P35625 211 aa8.8□□□□□ -1
RNF4-221ENST00000513643 DGKQP52824 942 aa8.8□□□□□ -1
RNF4-221ENST00000513643 CLDN18P56856 261 aa8.8□□□□□ -1
RNF4-221ENST00000513643 PPP2R2AP63151 447 aa8.8□□□□□ -1
RNF4-221ENST00000513643 POU6F2P78424 691 aaPredicted RBP8.8□□□□□ -1
RNF4-221ENST00000513643 C17orf67Q0P5P2 114 aa8.8□□□□□ -1
RNF4-221ENST00000513643 GANABQ14697 944 aaKnown RBP8.8□□□□□ -1
RNF4-221ENST00000513643 GSTA3Q16772 222 aa8.8□□□□□ -1
RNF4-221ENST00000513643 FAM174BQ3ZCQ3 159 aa8.8□□□□□ -1
RNF4-221ENST00000513643 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.8□□□□□ -1
RNF4-221ENST00000513643 CCNJQ5T5M9 372 aa8.8□□□□□ -1
RNF4-221ENST00000513643 ZNF585AQ6P3V2 769 aa8.8□□□□□ -1
RNF4-221ENST00000513643 BHLHB9Q6PI77 547 aa8.8□□□□□ -1
RNF4-221ENST00000513643 FIGNL1Q6PIW4 674 aa8.8□□□□□ -1
RNF4-221ENST00000513643 LIX1LQ8IVB5 337 aa8.8□□□□□ -1
RNF4-221ENST00000513643 PM20D2Q8IYS1 436 aa8.8□□□□□ -1
RNF4-221ENST00000513643 MBD3L2Q8NHZ7 208 aaPredicted RBP8.8□□□□□ -1
RNF4-221ENST00000513643 FBXO30Q8TB52 745 aa8.8□□□□□ -1
RNF4-221ENST00000513643 ASB5Q8WWX0 329 aa8.8□□□□□ -1
RNF4-221ENST00000513643 CDS1Q92903 461 aa8.8□□□□□ -1
RNF4-221ENST00000513643 NEURL3Q96EH8 262 aa8.8□□□□□ -1
RNF4-221ENST00000513643 OR7D2Q96RA2 312 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms