RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 SDR42E2A6NKP2 422 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 SCAMP2O15127 329 aaKnown RBP9.41□□□□□ -0.9
SNF8-207ENST00000509995 RAD51DO75771 328 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 OPN1LWP04000 364 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 FAM58BPP0C7Q3 252 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 PCNAP12004 261 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 IFNGR1P15260 489 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 GABRB3P28472 473 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 KRT20P35900 424 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 MAGEA1P43355 309 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 OR3A2P47893 321 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 PPOXP50336 477 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 EMDP50402 254 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 IDH3GP51553 393 aaPredicted RBP9.41□□□□□ -0.9
SNF8-207ENST00000509995 XKP51811 444 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 PNLIPRP2P54317 469 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 CDK16Q00536 496 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 CHRNEQ04844 493 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 HSP90AA5PQ58FG0 334 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 ZNF786Q8N393 782 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
SNF8-207ENST00000509995 OR4K14Q8NGD5 310 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 OR52R1Q8NGF1 315 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 WFDC12Q8WWY7 111 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 C22orf15Q8WYQ4 148 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 EFHD2Q96C19 240 aaPredicted RBP9.41□□□□□ -0.9
SNF8-207ENST00000509995 REXO5Q96IC2 774 aaKnown RBP9.41□□□□□ -0.9
SNF8-207ENST00000509995 DUX5Q96PT3 197 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 CENPKQ9BS16 269 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 TMEM79Q9BSE2 394 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 SDHAF3Q9NRP4 125 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 MOKQ9UQ07 419 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 VDAC3Q9Y277 283 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 TRAF6Q9Y4K3 522 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 CORINQ9Y5Q5 1042 aa9.41□□□□□ -0.9
SNF8-207ENST00000509995 TRAV20A0A0B4J274 112 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 A0A1W2PR80 420 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 ATP6V1G2-DDX39BF2Z307 99 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 YES1P07947 543 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 CCDC175P0C221 793 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 CT45A8P0DMV1 189 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 CT45A9P0DMV2 189 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 PORP16435 677 aaPredicted RBP9.4□□□□□ -0.9
SNF8-207ENST00000509995 ADRA2CP18825 462 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 EDNRAP25101 427 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 SERPINB1P30740 379 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 CORO7P57737 925 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 MRPS22P82650 360 aaKnown RBP9.4□□□□□ -0.9
SNF8-207ENST00000509995 DUSP2Q05923 314 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 RASGEF1BQ0VAM2 473 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 TBCCQ15814 346 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 PDK4Q16654 411 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 CT45A2Q5DJT8 189 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 TCHHL1Q5QJ38 904 aaPredicted RBP9.4□□□□□ -0.9
SNF8-207ENST00000509995 SH2D4BQ5SQS7 431 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 CYP20A1Q6UW02 462 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 FRA10AC1Q70Z53 315 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 RHOUQ7L0Q8 258 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 LAS2Q8IYD9 372 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 RNF175Q8N4F7 328 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 ZNF433Q8N7K0 673 aaPredicted RBP9.4□□□□□ -0.9
SNF8-207ENST00000509995 UHMK1Q8TAS1 419 aaKnown RBP9.4□□□□□ -0.9
SNF8-207ENST00000509995 WDR60Q8WVS4 1066 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 OSTF1Q92882 214 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 UBE2E3Q969T4 207 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 LRRC58Q96CX6 371 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 FRMD8P1Q9BZ68 369 aaPredicted RBP9.4□□□□□ -0.9
SNF8-207ENST00000509995 RTN4RQ9BZR6 473 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 TMEM185BQ9H7F4 350 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 SAYSD1Q9NPB0 183 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 G6PC2Q9NQR9 355 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 ABCG2Q9UNQ0 655 aa9.4□□□□□ -0.9
SNF8-207ENST00000509995 MAGEB16A2A368 324 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 NCF1BA6NI72 391 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 NCF1CA8MVU1 366 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 TIMM23O14925 209 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 FADS1O60427 444 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 PRSS23O95084 383 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 IL33O95760 270 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 TFP02787 698 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 ATP1B1P05026 303 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 NCF1P14598 390 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 ZNF37AP17032 561 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 EPORP19235 508 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 BSGP35613 385 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 SERPINF1P36955 418 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 ARFIP1P53367 373 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 CARD18P57730 90 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 RAC1P63000 192 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 SARNPP82979 210 aaKnown RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 IRF8Q02556 426 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 CHIT1Q13231 466 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 SNX1Q13596 522 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 E2F2Q14209 437 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 ZNF628Q5EBL2 1059 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 FBXO48Q5FWF7 155 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms