RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CD209Q9NNX6 404 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 SLC40A1Q9NP59 571 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 NOX4Q9NPH5 578 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 MRPL40Q9NQ50 206 aaKnown RBP3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 LYARQ9NX58 379 aaKnown RBP3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 ELOVL2Q9NXB9 296 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 GNG12Q9UBI6 72 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 MRM2Q9UI43 246 aaKnown RBP3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 PILRAQ9UKJ1 303 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 PADI3Q9ULW8 664 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 ADAMTS5Q9UNA0 930 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 POLDIP2Q9Y2S7 368 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 STARD10Q9Y365 291 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 LOXL2Q9Y4K0 774 aa3.86□□□□□ -1.79
SMARCA5-202ENST00000508573 LOC105371267A0A1B0GV96 52 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 BCLAF3A2AJT9 711 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 FABP12A6NFH5 140 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 GOLGA8JA6NMD2 632 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 SRRM4A7MD48 611 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ARHGEF33A8MVX0 844 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 E5RGE8 158 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MKRN2OSH3BPM6 223 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 KLRC4-KLRK1H3BQV0 150 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 H3BQV1 296 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 FBP2O00757 339 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 CYB561D2O14569 222 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 RRHO14718 337 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 HAT1O14929 419 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 RAB29O14966 203 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZBTB5O15062 677 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 CLOCKO15516 846 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 GRAP2O75791 330 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 NDUFB4O95168 129 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ANP32DO95626 131 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 CST4P01036 141 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 SERPINA6P08185 405 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 NPSP0C0P6 89 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 CT62P0C5K7 136 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 GSTT2P0CG29 244 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 GSTT2BP0CG30 244 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 TRIM49P0CI25 452 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 TRIM49CP0CI26 452 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 GOLGA8HP0CJ92 632 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 PRF1P14222 555 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF23P17027 643 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MSH3P20585 1137 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 PIGAP37287 484 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 CDKN2CP42773 168 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MRPL19P49406 292 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 HMGCS2P54868 508 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 PSMD4P55036 377 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 CLDN18P56856 261 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ACTBP60709 375 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ACTA2P62736 377 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 HERVK_113P63132 956 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ERVK-25P63136 954 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ACTG1P63261 375 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ACTG2P63267 376 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ACTC1P68032 377 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ACTA1P68133 377 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 LCN2P80188 198 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 GLO1Q04760 184 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 FAM27E3Q08E93 113 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF415Q09FC8 603 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 STX5Q13190 355 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 C1orf61Q13536 156 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 KPNB1Q14974 876 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MOGQ16653 247 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 KNOP1Q1ED39 458 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MIDNQ504T8 468 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF542PQ5EBM4 170 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 OTUD3Q5T2D3 398 aaPredicted RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF691Q5VV52 312 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 TIGD3Q6B0B8 471 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 C11orf63Q6NUN7 778 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 FUT10Q6P4F1 479 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 TTC33Q6PID6 262 aaPredicted RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 RHBDF2Q6PJF5 856 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 SHC4Q6S5L8 630 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 VITQ6UXI7 678 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 C19orf35Q6ZS72 473 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 PID1Q7Z2X4 250 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 BCDIN3DQ7Z5W3 292 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 TRIM69Q86WT6 500 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 KMT5CQ86Y97 462 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 PLD3Q8IV08 490 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MMAAQ8IVH4 418 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MFSD6LQ8IWD5 586 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF34Q8IZ26 560 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MCOLN2Q8IZK6 566 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 PELI3Q8N2H9 469 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 MARVELD2Q8N4S9 558 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 SLC5A8Q8N695 610 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 HORMAD2Q8N7B1 307 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ARL14EPQ8N8R7 260 aaPredicted RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 LRRC75AQ8NAA5 344 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ADAD2Q8NCV1 583 aaKnown RBP3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF680Q8NEM1 530 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 OR4K1Q8NGD4 311 aa3.85□□□□□ -1.79
SMARCA5-202ENST00000508573 OR6M1Q8NGM8 313 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms