RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MESP1Q9BRJ9 268 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 DUSP22Q9NRW4 184 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 CDC42EP2O14613 210 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 KIAA0513O60268 411 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 CTNSO60931 367 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 APOL3O95236 402 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 RPS4Y1P22090 263 aaKnown RBP11.31□□□□□ -0.6
LIN54-206ENST00000506560 LIPAP38571 399 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 POU6F2P78424 691 aaPredicted RBP11.31□□□□□ -0.6
LIN54-206ENST00000506560 GINS1Q14691 196 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 C1orf189Q5VU69 101 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 SLX4IPQ5VYV7 408 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 ZNF420Q8TAQ5 688 aaPredicted RBP11.31□□□□□ -0.6
LIN54-206ENST00000506560 CNOT9Q92600 299 aaKnown RBP11.31□□□□□ -0.6
LIN54-206ENST00000506560 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 FKBP14Q9NWM8 211 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 GPR52Q9Y2T5 361 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 M0R082 166 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 BRINP1O60477 761 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 IFNA16P05015 189 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 TTKP33981 857 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 OMPP47874 163 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
LIN54-206ENST00000506560 NDUFA9Q16795 377 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 WDR45BQ5MNZ6 344 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 C12orf73Q69YU5 71 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 DESI1Q6ICB0 168 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 RCBTB1Q8NDN9 531 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 C16orf52Q8NHV5 167 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 ZDHHC12Q96GR4 267 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 VSTM2LQ96N03 204 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
LIN54-206ENST00000506560 TIMMDC1Q9NPL8 285 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 CUTCQ9NTM9 273 aa11.31□□□□□ -0.6
LIN54-206ENST00000506560 KPNA4O00629 521 aaPredicted RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 AP3D1O14617 1153 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 NUDT21O43809 227 aaKnown RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 NKX2-2O95096 273 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 CH25HO95992 272 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 CLPSP04118 112 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 CDK1P06493 297 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 GPR3P46089 330 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 SMIM11AP58511 58 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 DCTN2Q13561 401 aaKnown RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 LARS2Q15031 903 aaKnown RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 SOWAHCQ53LP3 525 aaPredicted RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 VWA2Q5GFL6 755 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 SYT6Q5T7P8 510 aaPredicted RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 DEPDC4Q8N2C3 294 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 PFN4Q8NHR9 129 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 CCDC74AQ96AQ1 378 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 PTCHD1Q96NR3 888 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 PRSS27Q9BQR3 290 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 SAP130Q9H0E3 1048 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 C20orf141Q9NUB4 165 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 EPHA6Q9UF33 1036 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 ENPP5Q9UJA9 477 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 MPDZO75970 2070 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 CDHR4A6H8M9 788 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 TRIM64BA6NI03 449 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 MAGEB3O15480 346 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 ZNF749O43361 778 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 TLX2O43763 284 aaPredicted RBP11.3□□□□□ -0.6
LIN54-206ENST00000506560 PFDN1O60925 122 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 NID1P14543 1247 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 CCNA2P20248 432 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 GRK5P34947 590 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 TGFBR2P37173 567 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 TMBIM6P55061 237 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 VBP1P61758 197 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 NCS1P62166 190 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 TUBA3CQ13748 450 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 TRAM2Q15035 370 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 FLYWCH1Q4VC44 716 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 MFSD4BQ5TF39 518 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 LYSMD4Q5XG99 296 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 PAQR6Q6TCH4 344 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 SDR16C5Q8N3Y7 309 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 NDNFQ8TB73 568 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 SLC38A4Q969I6 547 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 YIPF6Q96EC8 236 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 DGAT2Q96PD7 388 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 STACQ99469 402 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 ITPAQ9BY32 194 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 ATP13A2Q9NQ11 1180 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 LANCL2Q9NS86 450 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 PLCXD1Q9NUJ7 323 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 KLHL28Q9NXS3 571 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 FLRT3Q9NZU0 649 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 ALPK2Q86TB3 2170 aa11.3□□□□□ -0.6
LIN54-206ENST00000506560 SLITRK5O94991 958 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 CT45A8P0DMV1 189 aa11.29□□□□□ -0.6
LIN54-206ENST00000506560 CT45A9P0DMV2 189 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms