RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 GFRA1P56159 465 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 RPL38P63173 70 aaKnown RBP9.46□□□□□ -0.9
NR1I3-222ENST00000506018 PRR5P85299 388 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 SORDQ00796 357 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 OCRLQ01968 901 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 HSPB3Q12988 150 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 BCL2A1Q16548 175 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 GALNTL6Q49A17 601 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 DCST1Q5T197 706 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 KANK2Q63ZY3 851 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 OR5M10Q6IEU7 315 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 OR2A2Q6IF42 318 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 P4HA3Q7Z4N8 544 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 MEIOBQ8N635 442 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 NAXEQ8NCW5 288 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 GPR151Q8TDV0 419 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 FAM222BQ8WU58 562 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 GFM2Q969S9 779 aaKnown RBP9.46□□□□□ -0.9
NR1I3-222ENST00000506018 MTERF3Q96E29 417 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 SPG11Q96JI7 2443 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 PPP3R2Q96LZ3 170 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 UCN2Q96RP3 112 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 TUBA1CQ9BQE3 449 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 LMF2Q9BU23 707 aaKnown RBP9.46□□□□□ -0.9
NR1I3-222ENST00000506018 POLDIP3Q9BY77 421 aaKnown RBP9.46□□□□□ -0.9
NR1I3-222ENST00000506018 PIGMQ9H3S5 423 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 KIAA1549Q9HCM3 1950 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 HAO1Q9UJM8 370 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 FBXL2Q9UKC9 423 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 CSMD2Q7Z408 3487 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 MED13LQ71F56 2210 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 PCNX3Q9H6A9 2034 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 TRPC5OSA6NMA1 111 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 CLCA1A8K7I4 914 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 TBX19O60806 448 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 RCBTB2O95199 551 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 GOSR1O95249 250 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 IL33O95760 270 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 LINC00032P0C843 101 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 HPGDP15428 266 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF708P17019 499 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 SDC1P18827 310 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 HK1P19367 917 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 POU3F2P20265 443 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 GABRA3P34903 492 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 PRIM2P49643 509 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 DLX5P56178 289 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 WNT3P56703 355 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 C17orf67Q0P5P2 114 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 KIAA0040Q15053 153 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 NATD1Q8N6N6 113 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 CDRT4Q8N9R6 151 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 OR4N2Q8NGD1 307 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 TWIST2Q8WVJ9 160 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 NINJ1Q92982 152 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 RMND5BQ96G75 393 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 MS4A4EQ96PG1 132 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 TSSK3Q96PN8 268 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF317Q96PQ6 595 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 PRPF18Q99633 342 aaKnown RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 PIGQQ9BRB3 760 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 CLEC4MQ9H2X3 399 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 DSN1Q9H410 356 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 EQTNQ9NQ60 294 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 ACSS1Q9NUB1 689 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 ATAD3AQ9NVI7 634 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 CRIM1Q9NZV1 1036 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 RPH3AQ9Y2J0 694 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-222ENST00000506018 TRAF6Q9Y4K3 522 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 CCL27Q9Y4X3 112 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 DNAJC15Q9Y5T4 150 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 F8P00451 2351 aa9.45□□□□□ -0.9
NR1I3-222ENST00000506018 OTOGQ6ZRI0 2925 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 NUP214P35658 2090 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 LSM1O15116 133 aaKnown RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 HDAC3O15379 428 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 EMC8O43402 210 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 AKAP10O43572 662 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 ITM2AO43736 263 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 FADS1O60427 444 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 NME6O75414 186 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 CTAG2O75638 210 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 SOX30O94993 753 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 PSMG1O95456 288 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 FAM107AO95990 144 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 CRHP06850 196 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 TCEA1P23193 301 aaKnown RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 TACR1P25103 407 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 LCN1P31025 176 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 STARP49675 285 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 LHX2P50458 406 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 PRKAG1P54619 331 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 GAS1P54826 345 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 RPS3AP61247 264 aaKnown RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 CBX1P83916 185 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 STX5Q13190 355 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 GLYR1Q49A26 553 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-222ENST00000506018 ATP6AP1LQ52LC2 224 aa9.44□□□□□ -0.9
NR1I3-222ENST00000506018 ZCCHC12Q6PEW1 402 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms