RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 FGFBP1Q14512 234 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 SWT1Q5T5J6 900 aaKnown RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 RNF220Q5VTB9 566 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 OR2T5Q6IEZ7 315 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 APOOLQ6UXV4 268 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 C16orf47Q6ZP98 133 aaPredicted RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 NLGN4XQ8N0W4 816 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 ESX1Q8N693 406 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 FAM71CQ8NEG0 241 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 NLGN4YQ8NFZ3 816 aaPredicted RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 OR6T1Q8NGN1 323 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 OR2T29Q8NH02 315 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 OR8K3Q8NH51 312 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 OR52P1PQ8NH57 321 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 NUBPLQ8TB37 319 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 SPPL2AQ8TCT8 520 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 METTL21AQ8WXB1 218 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 PMM1Q92871 262 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 VMP1Q96GC9 406 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 CIB1Q99828 191 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 EFHD1Q9BUP0 239 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 RTN4RQ9BZR6 473 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 GABARAPL1Q9H0R8 117 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 COQ10BQ9H8M1 238 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 MTHFD2LQ9H903 347 aaPredicted RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 Q9N2J8 555 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 MAN2C1Q9NTJ4 1040 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 GPN3Q9UHW5 284 aaPredicted RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 CNOT11Q9UKZ1 510 aaKnown RBP9.58□□□□□ -0.88
TPM3-217ENST00000504663 BAG5Q9UL15 447 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 A4GNTQ9UNA3 340 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 CFL2Q9Y281 166 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 PCDHGA6Q9Y5G7 932 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 LYVE1Q9Y5Y7 322 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 AKAP13Q12802 2813 aa9.58□□□□□ -0.88
TPM3-217ENST00000504663 TRBV11-1A0A0K0K1C0 115 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 C2orf92A0A1B0GVN3 265 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 CDC14CA4D256 554 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 CDHR4A6H8M9 788 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 TMEM247A6NEH6 219 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 B4DXG7 233 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 C21orf140B9A014 251 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 E9PQ18 207 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 OIP5O43482 229 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 GFRA3O60609 400 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 DEAF1O75398 565 aaPredicted RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 SERPINB7O75635 380 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 SOX30O94993 753 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 RASAL1O95294 804 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 CST1P01037 141 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 IFNA14P01570 189 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 DBIP07108 87 aaKnown RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 CYP4B1P13584 511 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 PRG2P13727 222 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 NID1P14543 1247 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 TCN2P20062 427 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 HTR2AP28223 471 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 FOLR3P41439 243 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 DCAF7P61962 342 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 HPCAP84074 193 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 PPP2R2BQ00005 443 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 KCNC4Q03721 635 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 Q0VFX4 171 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 ZNHIT3Q15649 155 aaPredicted RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 GPR68Q15743 365 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 LRRC36Q1X8D7 754 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 GRAMD1BQ3KR37 738 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 ZNF311Q5JNZ3 666 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 PDZK1Q5T2W1 519 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 PPP4R4Q6NUP7 873 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 IZUMO2Q6UXV1 221 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 KRT73Q86Y46 540 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 PRR22Q8IZ63 422 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 SLC34A3Q8N130 599 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 ARMC10Q8N2F6 343 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 CBR4Q8N4T8 237 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 ICA1LQ8NDH6 482 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 RASSF5Q8WWW0 418 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 LZICQ8WZA0 190 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 DIO2Q92813 273 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 HGDQ93099 445 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 NKD1Q969G9 470 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 EFHD2Q96C19 240 aaPredicted RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 NTNG2Q96CW9 530 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 ZNF597Q96LX8 424 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 GAL3ST4Q96RP7 486 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 LPAR4Q99677 370 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 KLHDC3Q9BQ90 382 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 KLHL4Q9C0H6 718 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 LIN28AQ9H9Z2 209 aaKnown RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 ACER3Q9NUN7 267 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 RLIMQ9NVW2 624 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 DNAJB12Q9NXW2 375 aaKnown RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 COPS7AQ9UBW8 275 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 C19orf25Q9UFG5 118 aaPredicted RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 TMEFF2Q9UIK5 374 aaPredicted RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 WASF3Q9UPY6 502 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 FARSAQ9Y285 508 aaKnown RBP9.57□□□□□ -0.88
TPM3-217ENST00000504663 NTNG1Q9Y2I2 539 aa9.57□□□□□ -0.88
TPM3-217ENST00000504663 SH3GLB1Q9Y371 365 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms