RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TMCO6Q96DC7 493 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 TMEM19Q96HH6 336 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 JSRP1Q96MG2 331 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 G6PC3Q9BUM1 346 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 SLC38A1Q9H2H9 487 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 KAT8Q9H7Z6 458 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 TUBA8Q9NY65 449 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 P2RX2Q9UBL9 471 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 KCNE5Q9UJ90 142 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 WDR45Q9Y484 360 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 GMEB1Q9Y692 573 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 ATMQ13315 3056 aa12.15□□□□□ -0.46
PDLIM7-212ENST00000504380 NME4O00746 187 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 ADAM10O14672 748 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 GNB5O14775 395 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 GMFGO60234 142 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 STX11O75558 287 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 WISP2O76076 250 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 OXSR1O95747 527 aaPredicted RBP12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 AK1P00568 194 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 ARAFP10398 606 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 BMP2P12643 396 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 EVI2BP34910 448 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 DCTP40126 519 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 SLC7A2P52569 658 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 PSPHP78330 225 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 MAPK14Q16539 360 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 CYP51A1Q16850 503 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 OR5M10Q6IEU7 315 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 IFNEQ86WN2 208 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 ZZZ3Q8IYH5 903 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF614Q8N883 585 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 POGLUT1Q8NBL1 392 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM178AQ8NBL3 297 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 TAAR6Q96RI8 345 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 ECSITQ9BQ95 431 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 DOHHQ9BU89 302 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 ANGPTL4Q9BY76 406 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 CNIH4Q9P003 139 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 CORO2BQ9UQ03 480 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 NTNG1Q9Y2I2 539 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
PDLIM7-212ENST00000504380 B4DXG7 233 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 NPIPB9F8W1W9 429 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 CDK2AP1O14519 115 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 OIP5O43482 229 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 SOX30O94993 753 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 TBXA2RP21731 343 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 AQP1P29972 269 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 MAGEA8P43361 318 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 ATP12AP54707 1039 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 GAS1P54826 345 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 KCNJ2P63252 427 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 RPP38P78345 283 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 TXNL4AP83876 142 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 HPCAP84074 193 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 CDK6Q00534 326 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 SCARB2Q14108 478 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 CD226Q15762 336 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 NDUFAF6Q330K2 333 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 CALHM3Q86XJ0 350 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF619Q8N2I2 560 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 RNF148Q8N7C7 305 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 RBM15BQ8NDT2 890 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 RNF138Q8WVD3 245 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF583Q96ND8 569 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 SH3GL1Q99961 368 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 HOPXQ9BPY8 73 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 KLHDC3Q9BQ90 382 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 FAM173AQ9BQD7 235 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 TBL1XR1Q9BZK7 514 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 UBQLN4Q9NRR5 601 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 ADA2Q9NZK5 511 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 LIPT1Q9Y234 373 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 L3MBTL1Q9Y468 752 aa12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-212ENST00000504380 LRRC3CA6NJW4 275 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 CLDN24A6NM45 220 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 FAM166BA8MTA8 275 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 C5orf58C9J3I9 102 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 KLRC4-KLRK1H3BQV0 150 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 SCDO00767 359 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 KIAA0513O60268 411 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 BCAS1O75363 584 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 TRIM3O75382 744 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 UGT2B17O75795 530 aa12.12□□□□□ -0.47
PDLIM7-212ENST00000504380 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms