RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ANGPTL4Q9BY76 406 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 NXF5Q9H1B4 397 aaKnown RBP4.99□□□□□ -1.61
SPTA1-209ENST00000498708 WDR41Q9HAD4 459 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 GALNT9Q9HCQ5 603 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 SERHLQ9NQF3 203 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 SNX15Q9NRS6 342 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 TMEM160Q9NX00 188 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 MS4A12Q9NXJ0 267 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 NSMCE4AQ9NXX6 385 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 GALNT8Q9NY28 637 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 NUDT4Q9NZJ9 180 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 KLRF1Q9NZS2 232 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 CPSF2Q9P2I0 782 aaKnown RBP4.99□□□□□ -1.61
SPTA1-209ENST00000498708 LPAR3Q9UBY5 353 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.99□□□□□ -1.61
SPTA1-209ENST00000498708 RNF11Q9Y3C5 154 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 TESMINQ9Y4I5 508 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 ASB4Q9Y574 426 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 PCDHGB3Q9Y5G1 929 aa4.99□□□□□ -1.61
SPTA1-209ENST00000498708 A0A096LNT2 108 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 A0A0A6YYD5 115 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 TCRBV9S1A1TA0A576 114 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 MBD3L3A6NE82 208 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 CD8B2A6NJW9 211 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OR6C76A6NM76 312 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 C17orf51A8MQB3 221 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SNX4O95219 450 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 KLK1P06870 262 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SLC35E2BP0CK96 405 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SLC35E2P0CK97 266 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 GFAPP14136 432 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ITGA2P17301 1181 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 GPX3P22352 226 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PTX3P26022 381 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ABCD3P28288 659 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PTPN6P29350 595 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SPRP35270 261 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 IDUAP35475 653 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 BSGP35613 385 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 FEN1P39748 380 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 GP5P40197 560 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 LIMS1P48059 325 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 XKP51811 444 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SLURP1P55000 103 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SH3BGRP55822 239 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 GPX6P59796 221 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 RPP38P78345 283 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PHEXP78562 749 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PRR5P85299 388 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OCRLQ01968 901 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PLP2Q04941 152 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 FAM27E3Q08E93 113 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PLCXD2Q0VAA5 305 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 TBL3Q12788 808 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 FRG1Q14331 258 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SF3B4Q15427 424 aaKnown RBP eCLIP4.98□□□□□ -1.612e-7■■□□□ 14.4
SPTA1-209ENST00000498708 UAP1Q16222 522 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 TMEM249Q2WGJ8 235 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SPATS1Q496A3 300 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PRR31Q5SQ13 230 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 TIGD3Q6B0B8 471 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OR5M10Q6IEU7 315 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OR52E8Q6IFG1 317 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PPP4R4Q6NUP7 873 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 DNM1P46Q6ZS02 220 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 C3orf62Q6ZUJ4 267 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ZNF550Q7Z398 422 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 P4HA3Q7Z4N8 544 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 TBC1D1Q86TI0 1168 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ISCA2Q86U28 154 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 CCDC25Q86WR0 208 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 NUDT13Q86X67 352 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 UBQLNLQ8IYU4 475 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 DND1Q8IYX4 353 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 SAMD14Q8IZD0 417 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ZCCHC7Q8N3Z6 543 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 C3orf56Q8N813 242 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ZNF615Q8N8J6 731 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ZNF441Q8N8Z8 693 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 CNEP1R1Q8N9A8 125 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OR4K14Q8NGD5 310 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 MBD3L2Q8NHZ7 208 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 MIPOL1Q8TD10 442 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ATP6V1E2Q96A05 226 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ADIPOR1Q96A54 375 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OMA1Q96E52 524 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 TMEM41AQ96HV5 264 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 RSRC1Q96IZ7 334 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 MARK4Q96L34 752 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 FAM111AQ96PZ2 611 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ATOH8Q96SQ7 321 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 GPR22Q99680 433 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 CPNE1Q99829 537 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 PELOQ9BRX2 385 aaKnown RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 MCMBPQ9BTE3 642 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 OSBPL11Q9BXB4 747 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 ZNF717Q9BY31 904 aaPredicted RBP4.98□□□□□ -1.61
SPTA1-209ENST00000498708 UBQLN3Q9H347 655 aa4.98□□□□□ -1.61
SPTA1-209ENST00000498708 C12orf65Q9H3J6 166 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms