RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TM4SF18Q96CE8 201 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 ERP27Q96DN0 273 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 REXO5Q96IC2 774 aaKnown RBP10.39□□□□□ -0.75
CDK9-205ENST00000498339 ZNF681Q96N22 645 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 POTEKPQ9BYX7 375 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 TRIM2Q9C040 744 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 POU2F3Q9UKI9 436 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 B3GALT5Q9Y2C3 310 aa10.39□□□□□ -0.75
CDK9-205ENST00000498339 A0A096LNT2 108 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 FAM159BA6NKW6 160 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 FADS1O60427 444 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 RAMP1O60894 148 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 COQ9O75208 318 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 NTN1O95631 604 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 CD8AP01732 235 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 IGHV4-31P0DP07 118 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 ZNF17P17021 662 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 IGFBP5P24593 272 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 THBS2P35442 1172 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 IRX1P78414 480 aaPredicted RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 GALNT1Q10472 559 aaPredicted RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 RAB35Q15286 201 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 DECR1Q16698 335 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDK9-205ENST00000498339 GLYR1Q49A26 553 aaPredicted RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 PDSS1Q5T2R2 415 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 SFRP5Q5T4F7 317 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 HBMQ6B0K9 141 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 FAM166AQ6J272 317 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 MFSD12Q6NUT3 480 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 TFAP2EQ6VUC0 442 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 C1orf52Q8N6N3 182 aaKnown RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 OR10H5Q8NGA6 315 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 OR2W6PQ8NHA6 318 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 OR2V1Q8NHB1 315 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 SELENOMQ8WWX9 145 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 FAM168AQ92567 244 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 SLC9A6Q92581 669 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 PHF21BQ96EK2 531 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 HBEGFQ99075 208 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 RTN4RQ9BZR6 473 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 FAM120CQ9NX05 1096 aaKnown RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 MRTO4Q9UKD2 239 aaKnown RBP10.38□□□□□ -0.75
CDK9-205ENST00000498339 SNX12Q9UMY4 172 aa10.38□□□□□ -0.75
CDK9-205ENST00000498339 DYSFO75923 2080 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 ABCD4O14678 606 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 KIAA0513O60268 411 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 GCM2O75603 506 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 ANGPTL1O95841 491 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 ADAP00813 363 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 PDYNP01213 254 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 THBS1P07996 1170 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 IL3P08700 152 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 ZNF41P51814 821 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 PSMD4P55036 377 aaKnown RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 PSG6Q00889 435 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 C17orf67Q0P5P2 114 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 ACAP2Q15057 778 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 ZNHIT3Q15649 155 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 C3orf62Q6ZUJ4 267 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 ESPNLQ6ZVH7 1005 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 BHLHA15Q7RTS1 189 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 SAMD14Q8IZD0 417 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 CENPLQ8N0S6 344 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 GABRG1Q8N1C3 465 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 PTGR2Q8N8N7 351 aaPredicted RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 OR7G2Q8NG99 324 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 PIWIL2Q8TC59 973 aaKnown RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 ABHD3Q8WU67 409 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 BBS4Q96RK4 519 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 C12orf65Q9H3J6 166 aaKnown RBP10.37□□□□□ -0.75
CDK9-205ENST00000498339 Q9N2J8 555 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 NMRK1Q9NWW6 199 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 SNX6Q9UNH7 406 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 SNX24Q9Y343 169 aa10.37□□□□□ -0.75
CDK9-205ENST00000498339 GNG14A0A1W2PPG7 69 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 ELOA3DA6NLF2 546 aaPredicted RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 SHISA9B4DS77 424 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 SPRY1O43609 319 aaPredicted RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 UTS2O95399 124 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 USF1P22415 310 aaPredicted RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 SFTPDP35247 375 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 GZMKP49863 264 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 TRA2BP62995 288 aaKnown RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 LSM11P83369 360 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDK9-205ENST00000498339 TRAF3Q13114 568 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 CALCOCO2Q13137 446 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 GGTLC2Q14390 218 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 PPA1Q15181 289 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 ELOA3BQ3SY89 546 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 CYP27C1Q4G0S4 372 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 FAM120AOSQ5T036 256 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 C12orf54Q6X4T0 127 aa10.36□□□□□ -0.75
CDK9-205ENST00000498339 DNAJC14Q6Y2X3 702 aaPredicted RBP10.36□□□□□ -0.75
CDK9-205ENST00000498339 NUFIP2Q7Z417 695 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms