RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 HSF4Q9ULV5 492 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SHOC2Q9UQ13 582 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 YARS2Q9Y2Z4 477 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 IPPQ9Y573 584 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SMAD5-AS1Q9Y6J3 95 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CLCA3PQ9Y6N3 262 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF780BQ9Y6R6 833 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ABCC4O15439 1325 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UBN2Q6ZU65 1347 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PNMA6EA0A0J9YXQ4 647 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 A0A1B0GVM2 712 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TP53I11O14683 189 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CHEK1O14757 476 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EDIL3O43854 480 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NDUFS5O43920 106 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FGF17O60258 216 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CUTAO60888 179 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 AVILO75366 819 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 H2AFYO75367 372 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SEMA3DO95025 777 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR5F1O95221 314 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GGPS1O95749 300 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TXNDC12O95881 172 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 APOEP02649 317 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GLULP15104 373 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RPL7P18124 248 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 KRT4P19013 534 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 BGNP21810 368 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PCSK1P29120 753 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HLA-FP30511 346 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC16A2P36021 539 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ACAA2P42765 397 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 CPT1AP50416 773 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 JAM2P57087 298 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TAS2R20P59543 309 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 YWHAEP62258 255 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 SNRPEP62304 92 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 PSMC6P62333 389 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SRPXP78539 464 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RPL36AP83881 106 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 H3F3AP84243 136 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MYL7Q01449 175 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DYRK1AQ13627 763 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NR1D2Q14995 579 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PROSER3Q2NL68 480 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 VPS26BQ4G0F5 336 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TFDP3Q5H9I0 405 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 AARS2Q5JTZ9 985 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 TCTE1Q5JU00 501 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC10A5Q5PT55 438 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ELFN2Q5R3F8 820 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FHL5Q5TD97 284 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRAMEF5Q5TYX0 476 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRAMEF6Q5VXH4 476 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NFXL1Q6ZNB6 911 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MBOAT1Q6ZNC8 495 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C15orf52Q6ZUT6 534 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 MBOAT2Q6ZWT7 520 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRSS41Q7RTY9 318 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MAPKAPK5Q8IW41 473 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NIM1KQ8IY84 436 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CPNE9Q8IYJ1 553 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CADM3Q8N126 398 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 AMER3Q8N944 861 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 BEST4Q8NFU0 473 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TMEM255BQ8WV15 326 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LPGAT1Q92604 370 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 COPS5Q92905 334 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 AZIN2Q96A70 460 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 MOB3AQ96BX8 217 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SFRP2Q96HF1 295 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RNF170Q96K19 258 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C12orf42Q96LP6 360 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRRC1Q96M27 445 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF830Q96NB3 372 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 RUNDC3BQ96NL0 473 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CSPG4P5Q96PW8 444 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR4K3Q96R72 315 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF607Q96SK3 696 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RAD9AQ99638 391 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZNF251Q9BRH9 671 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 WRAP53Q9BUR4 548 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 AP1M1Q9BXS5 423 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 IMUPQ9GZP8 106 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ASAH2Q9NR71 780 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RBM12Q9NTZ6 932 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 B4GALT7Q9UBV7 327 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC23A2Q9UGH3 650 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LAMP5Q9UJQ1 280 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CARD8Q9Y2G2 431 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 POFUT2Q9Y2G5 429 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CSDC2Q9Y534 153 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 YTHDF2Q9Y5A9 579 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 TIMM13Q9Y5L4 95 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 CEPT1Q9Y6K0 416 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 U3KQK5 164 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TET1Q8NFU7 2136 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SDHAF1A6NFY7 115 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FAM74A7A6NL05 159 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LRRC53A6NM62 1247 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms