RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 ATP6AP1LQ52LC2 224 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 OR2A2Q6IF42 318 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 ZCCHC12Q6PEW1 402 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 ADGRE4PQ86SQ3 457 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 MARCH3Q86UD3 253 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 NUP43Q8NFH3 380 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 CLHC1Q8NHS4 586 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 PPP1R14CQ8TAE6 165 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 AGR3Q8TD06 166 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 SLC9A6Q92581 669 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 INTS12Q96CB8 462 aaKnown RBP12.35□□□□□ -0.43
ABCD4-217ENST00000496015 RMND5BQ96G75 393 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-217ENST00000496015 PRPF18Q99633 342 aaKnown RBP12.35□□□□□ -0.43
ABCD4-217ENST00000496015 PIGQQ9BRB3 760 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 MECRQ9BV79 373 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 CLEC4MQ9H2X3 399 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-217ENST00000496015 ATAD3AQ9NVI7 634 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 MED11Q9P086 117 aa12.35□□□□□ -0.43
ABCD4-217ENST00000496015 NUP214P35658 2090 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-217ENST00000496015 MED13LQ71F56 2210 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 HIVEP1P15822 2718 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 GXYLT2A0PJZ3 443 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 SLC22A20A6NK97 555 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 A6NNC1 897 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 TMEM233B4DJY2 109 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 EBAG9O00559 213 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 PEX11AO75192 247 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 LYPLA1O75608 230 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-217ENST00000496015 NKX2-2O95096 273 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 HSPA4LO95757 839 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 ANGPTL1O95841 491 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 CRHP06850 196 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 ALOX5P09917 674 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 EPXP11678 715 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 LCN1P31025 176 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 FRKP42685 505 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-217ENST00000496015 SERPINB4P48594 390 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 PRIM2P49643 509 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 GYS2P54840 703 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 B3GALT5-AS1P59052 145 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 UGT3A2Q3SY77 523 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 GLYR1Q49A26 553 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-217ENST00000496015 SPNS3Q6ZMD2 512 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 UBQLNLQ8IYU4 475 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 NATD1Q8N6N6 113 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 OR6Y1Q8NGX8 325 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 PIK3R3Q92569 461 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 HOXB13Q92826 284 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-217ENST00000496015 C1GALT1C1Q96EU7 318 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 RBM24Q9BX46 236 aaKnown RBP12.34□□□□□ -0.43
ABCD4-217ENST00000496015 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 RASSF1Q9NS23 344 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 JKAMPQ9P055 326 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 NTMQ9P121 344 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 CLCF1Q9UBD9 225 aa12.34□□□□□ -0.43
ABCD4-217ENST00000496015 SCAMP2O15127 329 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 NDUFB5O43674 189 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 SOX30O94993 753 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 GOSR1O95249 250 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 BPGMP07738 259 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 NGFRP08138 427 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 DNAJA1P31689 397 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 RPS3AP61247 264 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 FOXF2Q12947 444 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 DAZAP2Q15038 168 aaPredicted RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 MLC1Q15049 377 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 LSM12Q3MHD2 195 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 CPTPQ5TA50 214 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 AGBL2Q5U5Z8 902 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ZCCHC23Q6ZST2 131 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 EXOC3L1Q86VI1 746 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 GCNT2Q8N0V5 402 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 COX18Q8N8Q8 333 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 FNDC5Q8NAU1 212 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 JADE3Q92613 823 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 NINJ1Q92982 152 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ZIM3Q96PE6 472 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 GPATCH1Q9BRR8 931 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 TMEM109Q9BVC6 243 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 UBQLN4Q9NRR5 601 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ZCCHC3Q9NUD5 404 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ATP6V1HQ9UI12 483 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 PACSIN3Q9UKS6 424 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 EIF3LQ9Y262 564 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 RRP15Q9Y3B9 282 aaKnown RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ZNF337Q9Y3M9 751 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 SNX8Q9Y5X2 465 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 AP4B1Q9Y6B7 739 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 ABCA4P78363 2273 aa12.33□□□□□ -0.44
ABCD4-217ENST00000496015 MAP1AP78559 2803 aaPredicted RBP12.33□□□□□ -0.44
ABCD4-217ENST00000496015 A0A087WZY1 265 aa12.32□□□□□ -0.44
ABCD4-217ENST00000496015 IGLV3-32A0A0A0MS00 114 aa12.32□□□□□ -0.44
ABCD4-217ENST00000496015 A0A1W2PRB8 838 aa12.32□□□□□ -0.44
ABCD4-217ENST00000496015 OR2M5A3KFT3 312 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms